RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PDZK1P1A8MUH7 402 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 H3BMH7 237 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 K7ELQ4 463 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 AGPSO00116 658 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 PEX12O00623 359 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 FANCGO15287 622 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 SLC19A2O60779 497 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZBTB11O95625 1053 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZNF7P17097 686 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 SOX18P35713 384 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 KPNA2P52292 529 aaKnown RBP8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 PNOCQ13519 176 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 CEBPEQ15744 281 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 DNTTIP2Q5QJE6 756 aaKnown RBP8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZNF658Q5TYW1 1059 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 AGAP9Q5VTM2 703 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 PRAMEF13Q5VWM6 474 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 MLIPQ5VWP3 458 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 FAAH2Q6GMR7 532 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 TTI2Q6NXR4 508 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 CRTC3Q6UUV7 619 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 SLFN11Q7Z7L1 901 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 ADGRG6Q86SQ4 1221 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 FAM71AQ8IYT1 594 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 NUDCD1Q96RS6 583 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 MESP1Q9BRJ9 268 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 SIX2Q9NPC8 291 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 TRIM10Q9UDY6 481 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 FBXL4Q9UKA2 621 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 ADAM21Q9UKJ8 722 aa8.6□□□□□ -1.03
TRAPPC9-212ENST00000521944 HCFC1P51610 2035 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 CUBNO60494 3623 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 A0A1W2PQ67 120 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 UBA6A0AVT1 1052 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 SLC9B1P1A6NJY1 282 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 TMEM150CB9EJG8 249 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZNF749O43361 778 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 CLDN7O95471 211 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 PRLP01236 227 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 IGHEP01854 428 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 ALBP02768 609 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 PYGLP06737 847 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 CYP11B1P15538 503 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 SDC4P31431 198 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 ARL4DP49703 201 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 SMSP52788 366 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 MAXP61244 160 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 IL10RBQ08334 325 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 RFTN1Q14699 578 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 KHDC1Q4VXA5 237 aaKnown RBP8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 LINC00696Q6ZRV3 163 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 USP45Q70EL2 814 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 C11orf96Q7Z7L8 435 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 RBM12BQ8IXT5 1001 aaKnown RBP8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 PTERQ96BW5 349 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 EID2BQ96D98 161 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 MAGEB10Q96LZ2 347 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 CD180Q99467 661 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 DPH2Q9BQC3 489 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 NDC1Q9BTX1 674 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 RBSNQ9H1K0 784 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 CATSPERBQ9H7T0 1116 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 SLC22A11Q9NSA0 550 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 HRASLS2Q9NWW9 162 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 PLA2G3Q9NZ20 509 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 FRRS1LQ9P0K9 344 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 APEX2Q9UBZ4 518 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 SEC14L3Q9UDX4 400 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 FZD10Q9ULW2 581 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 PADI2Q9Y2J8 665 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 ZNF835Q9Y2P0 537 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 MEMO1Q9Y316 297 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 NUP210LQ5VU65 1888 aa8.59□□□□□ -1.03
TRAPPC9-212ENST00000521944 A0A0J9YYE9 177 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 ARHGAP42A6NI28 874 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 C9J4A7 227 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 SOCS6O14544 535 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 ADAM10O14672 748 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 ZNHIT1O43257 154 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 HCRTR1O43613 425 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 RGS9O75916 674 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 TRBC1P01850 177 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 CTSBP07858 339 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 MSL3P1P0C860 447 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 PON1P27169 355 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 RFC1P35251 1148 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 FOLR3P41439 243 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 EIF1AXP47813 144 aaKnown RBP8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 SPINT3P49223 89 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 TNFSF10P50591 281 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 NOMO3P69849 1222 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 TFF3Q07654 80 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 MFAP5Q13361 173 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 PKP1Q13835 747 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 RPE65Q16518 533 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 TDRD12Q587J7 1177 aaKnown RBP8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 ARMC12Q5T9G4 340 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 TAF3Q5VWG9 929 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 NAA35Q5VZE5 725 aa8.58□□□□□ -1.04
TRAPPC9-212ENST00000521944 KIRREL2Q6UWL6 708 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms