RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 FLNCQ14315 2725 aa20.3■□□□□ 0.84
PABPC1-218ENST00000521865 SLC9B1P1A6NJY1 282 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 MAP3K7O43318 606 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 GP1BBP13224 206 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 ITGALP20701 1170 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 PSMB4P28070 264 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 CD97P48960 835 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 GSDMDP57764 484 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 OTUD4Q01804 1114 aaKnown RBP20.29■□□□□ 0.84
PABPC1-218ENST00000521865 IL10RAQ13651 578 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 SPA17Q15506 151 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 C11orf63Q6NUN7 778 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 RANBP10Q6VN20 620 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 CARFQ8N187 725 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 LILRA3Q8N6C8 439 aaPredicted RBP20.29■□□□□ 0.84
PABPC1-218ENST00000521865 ACTL9Q8TC94 416 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 HM13Q8TCT9 377 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 LCN9Q8WX39 176 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 CPT1BQ92523 772 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 LRRC45Q96CN5 670 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 LINC00615Q96LM1 132 aaPredicted RBP20.29■□□□□ 0.84
PABPC1-218ENST00000521865 FERD3LQ96RJ6 166 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 COPS8Q99627 209 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 GORASP1Q9BQQ3 440 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 SLC7A5P2Q9GIP4 190 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 ING2Q9H160 280 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 CHST8Q9H2A9 424 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 SRMSQ9H3Y6 488 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 FAM96AQ9H5X1 160 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 LUC7LQ9NQ29 371 aaKnown RBP20.29■□□□□ 0.84
PABPC1-218ENST00000521865 PCDHA13Q9Y5I0 950 aa20.29■□□□□ 0.84
PABPC1-218ENST00000521865 CCDC66A2RUB6 948 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 KCNN4O15554 427 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 XIAPP98170 497 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 SKOR2Q2VWA4 1001 aaPredicted RBP20.28■□□□□ 0.84
PABPC1-218ENST00000521865 ANKRD20A2Q5SQ80 823 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 ANKRD20A1Q5TYW2 823 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 PRAMEF17Q5VTA0 474 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 ANKRD20A3Q5VUR7 823 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 IZUMO3Q5VZ72 239 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 CAPRIN2Q6IMN6 1127 aaKnown RBP20.28■□□□□ 0.84
PABPC1-218ENST00000521865 SLC38A9Q8NBW4 561 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 ACVR1CQ8NER5 493 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 POMT2Q9UKY4 750 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 BTRCQ9Y297 605 aa20.28■□□□□ 0.84
PABPC1-218ENST00000521865 NBASA2RRP1 2371 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 CLEC18AA5D8T8 446 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 TMEM150CB9EJG8 249 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 MEN1O00255 615 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 MATN2O00339 956 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 IFRD1O00458 451 aaPredicted RBP20.27■□□□□ 0.84
PABPC1-218ENST00000521865 ATP1B2P14415 290 aaPredicted RBP20.27■□□□□ 0.84
PABPC1-218ENST00000521865 CYP2A7P20853 494 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 ADRA1AP35348 466 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 HADHAP40939 763 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 PTGIRP43119 386 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 PREPP48147 710 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 PRLHRP49683 370 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 NAP1L1P55209 391 aaKnown RBP20.27■□□□□ 0.84
PABPC1-218ENST00000521865 EIF3EP60228 445 aaKnown RBP20.27■□□□□ 0.84
PABPC1-218ENST00000521865 COPS2P61201 443 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 ZNF449Q6P9G9 518 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 DARS2Q6PI48 645 aaKnown RBP20.27■□□□□ 0.84
PABPC1-218ENST00000521865 CLEC18BQ6UXF7 455 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 SNX20Q7Z614 316 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 NXPE1Q8N323 547 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 ENDOVQ8N8Q3 282 aaKnown RBP20.27■□□□□ 0.84
PABPC1-218ENST00000521865 CLEC18CQ8NCF0 446 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 HEXDCQ8WVB3 486 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 FAM118BQ9BPY3 351 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 TBL1YQ9BQ87 522 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 LATS2Q9NRM7 1088 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 C1GALT1Q9NS00 363 aa20.27■□□□□ 0.84
PABPC1-218ENST00000521865 DOPEY2Q9Y3R5 2298 aa20.27■□□□□ 0.83
PABPC1-218ENST00000521865 BLACEA4D250 179 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 SGTAO43765 313 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 LCA5LO95447 670 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 RBP3P10745 1247 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 ABRQ12979 859 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 TBX2Q13207 712 aaPredicted RBP20.26■□□□□ 0.83
PABPC1-218ENST00000521865 SPARCL1Q14515 664 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 ZRANB3Q5FWF4 1079 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 DSELQ8IZU8 1212 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 CCDC110Q8TBZ0 833 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 CPT1CQ8TCG5 803 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 LRFN5Q96NI6 719 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 OSBPL8Q9BZF1 889 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 ACTR5Q9H9F9 607 aaPredicted RBP20.26■□□□□ 0.83
PABPC1-218ENST00000521865 VPS37BQ9H9H4 285 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 LRRC4CQ9HCJ2 640 aa20.26■□□□□ 0.83
PABPC1-218ENST00000521865 G3BP2Q9UN86 482 aaKnown RBP20.26■□□□□ 0.83
PABPC1-218ENST00000521865 PCDHGA9Q9Y5G4 932 aaKnown RBP20.26■□□□□ 0.83
PABPC1-218ENST00000521865 CCL22O00626 93 aa20.25■□□□□ 0.83
PABPC1-218ENST00000521865 PRDX3P30048 256 aaKnown RBP20.25■□□□□ 0.83
PABPC1-218ENST00000521865 MC4RP32245 332 aa20.25■□□□□ 0.83
PABPC1-218ENST00000521865 CYLC1P35663 651 aaPredicted RBP20.25■□□□□ 0.83
PABPC1-218ENST00000521865 CETN2P41208 172 aa20.25■□□□□ 0.83
PABPC1-218ENST00000521865 LMAN1P49257 510 aa20.25■□□□□ 0.83
PABPC1-218ENST00000521865 LAMB3Q13751 1172 aa20.25■□□□□ 0.83
PABPC1-218ENST00000521865 NADK2Q4G0N4 442 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms