RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 NLRP4Q96MN2 994 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 SPATA33Q96N06 139 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 GBP5Q96PP8 586 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 KATNB1Q9BVA0 655 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 C1QTNF7Q9BXJ2 289 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 MRPL9Q9BYD2 267 aaKnown RBP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 SEMA6AQ9H2E6 1030 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 ARRDC1-AS1Q9H2J1 176 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 FOXP1Q9H334 677 aaPredicted RBP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 LMAN1LQ9HAT1 526 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 RNF150Q9ULK6 438 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 WDR91A4D1P6 747 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 OR5K3A6NET4 321 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 NEMP2A6NFY4 417 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 DNAJC9-AS1A6NH13 148 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 INO80B-WBP1J3KQ70 363 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 IFIT3O14879 490 aaKnown RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 KDM4BO94953 1096 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLU7O95391 586 aaKnown RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 IGHV2-70P01814 119 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 TMEM191BP0C7N4 346 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 EEF2P13639 858 aaKnown RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 PDGFRAP16234 1089 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 TCEA1P23193 301 aaKnown RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 MCCP23508 829 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 PRKCIP41743 596 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 MTHFRP42898 656 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 ARCN1P48444 511 aaKnown RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 ENTPD1P49961 510 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 ALDH3A2P51648 485 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 UBASH3AP57075 661 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 CD81P60033 236 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 COG7P83436 770 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 YWHAHQ04917 246 aaPredicted RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLC20A2Q08357 652 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 PRKAA1Q13131 559 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 PPP2R5CQ13362 524 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 LASP1Q14847 261 aaKnown RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 EZH2Q15910 746 aaKnown RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 NHSL2Q5HYW2 709 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 GCNT6Q5T4J0 391 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZNF425Q6IV72 752 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 RGMBQ6NW40 437 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 PET117Q6UWS5 81 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 PLXDC2Q6UX71 529 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 COLCA1Q6ZS62 124 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZBTB49Q6ZSB9 765 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 IL17RELQ6ZVW7 336 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 ASB18Q6ZVZ8 466 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 MAP7D3Q8IWC1 876 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 C1orf52Q8N6N3 182 aaKnown RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 AMER3Q8N944 861 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 DBF4BQ8NFT6 615 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 OR5M8Q8NGP6 311 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 FGFBP3Q8TAT2 258 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 GRK7Q8WTQ7 553 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 FAM216AQ8WUB2 273 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 TANKQ92844 425 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 SNX21Q969T3 373 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLAMF9Q96A28 289 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 PDLIM5Q96HC4 596 aaKnown RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 TXNDC15Q96J42 360 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 QRFPRQ96P65 431 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLX1AQ9BQ83 275 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 MRPL44Q9H9J2 332 aaKnown RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 TBC1D17Q9HA65 648 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 PFDN4Q9NQP4 134 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 KLHL1Q9NR64 748 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 DDX43Q9NXZ2 648 aaKnown RBP3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 ELOVL5Q9NYP7 299 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 CDH7Q9ULB5 785 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 FZD10Q9ULW2 581 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 PAM16Q9Y3D7 125 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 YIPF1Q9Y548 306 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 SNX5Q9Y5X3 404 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 UNC13AQ9UPW8 1703 aa3.3□□□□□ -1.88
HMGN1P28-201ENST00000521340 GPRASP1Q5JY77 1395 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 A0A0U1RQG5 324 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 SOCS2O14508 198 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZBTB43O43298 467 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 NME6O75414 186 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLC22A3O75751 556 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 GLUD1P00367 558 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 LDLRP01130 860 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ATP6V1B1P15313 513 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ITGA2P17301 1181 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 GNAZP19086 355 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 AZGP1P25311 298 aaKnown RBP3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 PSMA3P25788 255 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 CD27P26842 260 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 HOXA11P31270 313 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 HSPA4P34932 840 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 MMP13P45452 471 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 LHX1P48742 406 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 GLUD2P49448 558 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ASCL1P50553 236 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 CAPZA1P52907 286 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 TAZQ16635 292 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZNF674Q2M3X9 581 aa3.29□□□□□ -1.88
HMGN1P28-201ENST00000521340 ANKRD20A4Q4UJ75 823 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms