RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 KIR3DX1Q9H7L2 352 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 GLOD4Q9HC38 313 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 FAM153AQ9UHL3 310 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 SPO11Q9Y5K1 396 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 WIPF3A6NGB9 483 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 IFRD1O00458 451 aaPredicted RBP11.18□□□□□ -0.62
MRPS28-206ENST00000520946 STX7O15400 261 aaKnown RBP11.18□□□□□ -0.62
MRPS28-206ENST00000520946 ZNF749O43361 778 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 H2AFZP0C0S5 128 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 TAS2R40P59535 323 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 DYNLT1P63172 113 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 TYRO3Q06418 890 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 ABRQ12979 859 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 LAMB3Q13751 1172 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 MESDQ14696 234 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 MYBPC3Q14896 1274 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 ANO6Q4KMQ2 910 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 TEX44Q53QW1 395 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 FAM182AQ5T1J6 154 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 H2AFVQ71UI9 128 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 B4GALNT4Q76KP1 1039 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 GALNT16Q8N428 558 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 DDHD1Q8NEL9 900 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 ACVR1CQ8NER5 493 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 OR1L3Q8NH93 324 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 ZNF398Q8TD17 642 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 RAPGEF5Q92565 580 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 FAF2Q96CS3 445 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 RBM41Q96IZ5 413 aaKnown RBP11.18□□□□□ -0.62
MRPS28-206ENST00000520946 GBP4Q96PP9 640 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 FSD1LQ9BXM9 530 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 HSD3B7Q9H2F3 369 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 ATP13A2Q9NQ11 1180 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 PCMTD2Q9NV79 361 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 IFT80Q9P2H3 777 aaPredicted RBP11.18□□□□□ -0.62
MRPS28-206ENST00000520946 UVRAGQ9P2Y5 699 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 TMPRSS11EQ9UL52 423 aa11.18□□□□□ -0.62
MRPS28-206ENST00000520946 PTRH2Q9Y3E5 179 aaKnown RBP11.18□□□□□ -0.62
MRPS28-206ENST00000520946 A0A087X0T9 212 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 C2orf74A8MZ97 194 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 CFAP99D6REC4 459 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 BUD23O43709 281 aaKnown RBP11.17□□□□□ -0.62
MRPS28-206ENST00000520946 KRT1P04264 644 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 FAM228BP0C875 321 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 TNNT1P13805 278 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 ITGA3P26006 1051 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 RORAP35398 523 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 LMAN1P49257 510 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 WNT3AP56704 352 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 LLGL1Q15334 1064 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 DCAF10Q5QP82 559 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 C1QL3Q5VWW1 255 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 FAM198BQ6UWH4 519 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 MRGPREQ86SM8 312 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 TICAM1Q8IUC6 712 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 SPDYE1Q8NFV5 336 aaPredicted RBP11.17□□□□□ -0.62
MRPS28-206ENST00000520946 OR2L2Q8NH16 312 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 TFB1MQ8WVM0 346 aaKnown RBP11.17□□□□□ -0.62
MRPS28-206ENST00000520946 SYN2Q92777 582 aaPredicted RBP11.17□□□□□ -0.62
MRPS28-206ENST00000520946 PPM1MQ96MI6 270 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 KLHL25Q9H0H3 589 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 DEF6Q9H4E7 631 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 TXLNGQ9NUQ3 528 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 KLHL8Q9P2G9 620 aaPredicted RBP11.17□□□□□ -0.62
MRPS28-206ENST00000520946 POMT2Q9UKY4 750 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 GTF3C3Q9Y5Q9 886 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 AP1M2Q9Y6Q5 423 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 UNC79Q9P2D8 2635 aa11.17□□□□□ -0.62
MRPS28-206ENST00000520946 UTP20O75691 2785 aaKnown RBP11.16□□□□□ -0.62
MRPS28-206ENST00000520946 CCDC66A2RUB6 948 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 C2orf81A6NN90 581 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 LRRTM2O43300 516 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 OR2B3O76000 313 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 PRAMEF1O95521 474 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 PRDX3P30048 256 aaKnown RBP11.16□□□□□ -0.62
MRPS28-206ENST00000520946 DCDP81605 110 aaKnown RBP11.16□□□□□ -0.62
MRPS28-206ENST00000520946 NOMO1Q15155 1222 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 FIGNQ5HY92 759 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 SIRPB2Q5JXA9 342 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 C1orf189Q5VU69 101 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 NPNTQ6UXI9 565 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 PID1Q7Z2X4 250 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 CPNE8Q86YQ8 564 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 PLD5Q8N7P1 536 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 ST6GALNAC3Q8NDV1 305 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 IPMKQ8NFU5 416 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 DTX3LQ8TDB6 740 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 UBE2Q2Q8WVN8 375 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
MRPS28-206ENST00000520946 PTERQ96BW5 349 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 CNDP1Q96KN2 507 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 TEKT5Q96M29 485 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 NAP1L5Q96NT1 182 aaPredicted RBP11.16□□□□□ -0.62
MRPS28-206ENST00000520946 GBP5Q96PP8 586 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 ASB8Q9H765 288 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 VPS37BQ9H9H4 285 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 P4HTMQ9NXG6 502 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 IL17CQ9P0M4 197 aa11.16□□□□□ -0.62
MRPS28-206ENST00000520946 CRLS1Q9UJA2 301 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms