RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 KLHL33A6NCF5 533 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 SLC9B1P1A6NJY1 282 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 TMCO5BA8MYB1 307 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 AGPSO00116 658 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 KCNN4O15554 427 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 ZNF749O43361 778 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 JRKO75564 520 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 TPM2P07951 284 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 TCF4P15884 667 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 ST6GAL1P15907 406 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 HOXB4P17483 251 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 HLA-DPA1P20036 260 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 CDH3P22223 829 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 CCNCP24863 283 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 ARCN1P48444 511 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 SLC25A11Q02978 314 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 CDC16Q13042 620 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 GALNT3Q14435 633 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 PAFAH1B3Q15102 231 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 TLR1Q15399 786 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 SLC14A2Q15849 920 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 IFI16Q16666 785 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 CYP2A13Q16696 494 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 NCBP2-AS2Q69YL0 99 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 RHBDD2Q6NTF9 364 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 ARMC6Q6NXE6 501 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 MRPL14Q6P1L8 145 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 DUS1LQ6P1R4 473 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 FBXO38Q6PIJ6 1188 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 B4GALNT4Q76KP1 1039 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 ZNF571Q7Z3V5 609 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 LUZP1Q86V48 1076 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 PARP9Q8IXQ6 854 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 DDHD1Q8NEL9 900 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 ANKRD20A12PQ8NF67 263 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 NR4A3Q92570 626 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 HDAC11Q96DB2 347 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 GBP5Q96PP8 586 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 CBX8Q9HC52 389 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 ATP13A2Q9NQ11 1180 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 OLAHQ9NV23 265 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 IMP3Q9NV31 184 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 RBM22Q9NW64 420 aaKnown RBP eCLIP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 TRIM10Q9UDY6 481 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 PSMD13Q9UNM6 376 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 PTRH2Q9Y3E5 179 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 TTLL3Q9Y4R7 772 aa8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 DNMT3AQ9Y6K1 912 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-215ENST00000519309 OR6C74A6NCV1 312 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 MASP2O00187 686 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 DDX3XO00571 662 aaKnown RBP eCLIP8.13□□□□□ -1.113e-10■■■■□ 25.2
CTNNA1-215ENST00000519309 LDB2O43679 373 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 RARAP10276 462 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 CD1EP15812 388 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 FERP16591 822 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 AGAP20933 346 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 NDUFS1P28331 727 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 CD86P42081 329 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 CA7P43166 264 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 PREPP48147 710 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 LMAN1P49257 510 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 CTSCP53634 463 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 TMEM115Q12893 351 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 PRKAA1Q13131 559 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 XRCC4Q13426 336 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 NFE2L1Q14494 772 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.13□□□□□ -1.118e-8■□□□□ 9.7
CTNNA1-215ENST00000519309 ATP13A5Q4VNC0 1218 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 AGAP7PQ5VUJ5 663 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 METRNLQ641Q3 311 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 MRGPRGQ86SM5 289 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 NIPA2Q8N8Q9 360 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 ACBD4Q8NC06 268 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 DNAJB14Q8TBM8 379 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 BRSK1Q8TDC3 778 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 HSPH1Q92598 858 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 TADA1Q96BN2 335 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 PTERQ96BW5 349 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 RMDN2Q96LZ7 410 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 AGAP4Q96P64 663 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 INSM2Q96T92 566 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 CHRNA10Q9GZZ6 450 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 EPS8L2Q9H6S3 715 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 SLC6A20Q9NP91 592 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 SMOXQ9NWM0 555 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 SERTAD3Q9UJW9 196 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 FBXL4Q9UKA2 621 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 SHOC2Q9UQ13 582 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 AP1M2Q9Y6Q5 423 aa8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 FLNAP21333 2647 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-215ENST00000519309 PRRC2AP48634 2157 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-215ENST00000519309 CCDC66A2RUB6 948 aa8.12□□□□□ -1.11
CTNNA1-215ENST00000519309 PRICKLE3O43900 615 aaPredicted RBP8.12□□□□□ -1.11
CTNNA1-215ENST00000519309 SLC4A1P02730 911 aa8.12□□□□□ -1.11
CTNNA1-215ENST00000519309 SNRPB2P08579 225 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-215ENST00000519309 CCDC172P0C7W6 258 aa8.12□□□□□ -1.11
CTNNA1-215ENST00000519309 PIRTP0C851 137 aa8.12□□□□□ -1.11
CTNNA1-215ENST00000519309 CBSLP0DN79 551 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms