RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 NUP62P37198 522 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 EIF1P41567 113 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ETV4P43268 484 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 GZMKP49863 264 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 HSPA2P54652 639 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 PRMT2P55345 433 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ERVK-8P63133 956 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 NKX3-2P78367 333 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RHDQ02161 417 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 CREMQ03060 361 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF91Q05481 1191 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 FSTL1Q12841 308 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 CHAF1BQ13112 559 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 NME3Q13232 169 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ART3Q13508 389 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 GRAPQ13588 217 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RAPSNQ13702 412 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 SMCO1Q147U7 214 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ACOX1Q15067 660 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 PON3Q15166 354 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 PPA1Q15181 289 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM214AQ32MH5 1076 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ATP13A5Q4VNC0 1218 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 NHSL2Q5HYW2 709 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 NOMO2Q5JPE7 1267 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF484Q5JVG2 852 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 SPANXN2Q5MJ10 180 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 SAPCD1Q5SSQ6 148 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TAF2Q6P1X5 1199 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 BHLHB9Q6PI77 547 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM65Q6PI78 240 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 C6orf15Q6UXA7 325 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TFAP2EQ6VUC0 442 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMPRSS9Q7Z410 1059 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 USP37Q86T82 979 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM129CQ86XR2 697 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC13A5Q86YT5 568 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TBC1D10CQ8IV04 446 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 PLD3Q8IV08 490 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 IGDCC3Q8IVU1 814 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 IFNL2Q8IZJ0 200 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 PGAM4Q8N0Y7 254 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR8H2Q8N162 312 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC25A41Q8N5S1 370 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 EIF4E3Q8N5X7 224 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 PRELID2Q8N945 189 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 GDPD1Q8N9F7 314 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 BANPQ8N9N5 519 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZBTB38Q8NAP3 1195 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 FANCBQ8NB91 859 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM35BQ8NCS4 154 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR1M1Q8NGA1 313 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 CLHC1Q8NHS4 586 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 PSMA8Q8TAA3 256 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 NDNFQ8TB73 568 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 FEZF2Q8TBJ5 459 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 MAGEE2Q8TD90 523 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ELP5Q8TE02 316 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 DCAKDQ8WVC6 231 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ASB12Q8WXK4 309 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 GTF3AQ92664 365 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 HTRA1Q92743 480 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RBPMSQ93062 196 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RFKQ969G6 155 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 POP5Q969H6 163 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 FBXW5Q969U6 566 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RFT1Q96AA3 541 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRIM43Q96BQ3 446 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZHX1-C8orf76Q96EF9 292 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 C19orf60Q96EN9 201 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ST6GAL2Q96JF0 529 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 CLPTM1LQ96KA5 538 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RNF145Q96MT1 663 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RDH12Q96NR8 316 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 FCRL3Q96P31 734 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 CPXM1Q96SM3 734 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 PLIN2Q99541 437 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 APBA2Q99767 749 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 GDF15Q99988 308 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRIM62Q9BVG3 475 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 SPATA9Q9BWV2 254 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RNF26Q9BY78 433 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 GPR61Q9BZJ8 451 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TWSG1Q9GZX9 223 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 NUAK2Q9H093 628 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 DSN1Q9H410 356 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RANBP3Q9H6Z4 567 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 COQ10BQ9H8M1 238 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 C14orf93Q9H972 538 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 LRRC40Q9H9A6 602 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF408Q9H9D4 720 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 CRLF2Q9HC73 371 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF334Q9HCZ1 680 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 SMYD2Q9NRG4 433 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 SNX15Q9NRS6 342 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TOPORSQ9NS56 1045 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 COA4Q9NYJ1 87 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TAS2R9Q9NYW1 312 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ARMCX1Q9P291 453 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 ASH2LQ9UBL3 628 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms