RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 VNN3Q9NY84 501 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 KLHL3Q9UH77 587 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 PCDHB14Q9Y5E9 798 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 NOX1Q9Y5S8 564 aa12.18□□□□□ -0.46
PCM1-203ENST00000517545 LOC285095A0A1B0GVY8 99 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 LCHNA4D1U4 455 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 E2F3O00716 465 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 ANKRD28O15084 1053 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 MUSKO15146 869 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 DNAJB5O75953 348 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 CCDC159P0C7I6 412 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 ALDH7A1P49419 539 aaKnown RBP12.17□□□□□ -0.46
PCM1-203ENST00000517545 IFITM2Q01629 132 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 ACVR1Q04771 509 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 RAD51Q06609 339 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 PTGR1Q14914 329 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 NR6A1Q15406 480 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 SLC22A15Q8IZD6 547 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 SVOPLQ8N434 492 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 OR56A4Q8NGH8 313 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 HASPINQ8TF76 798 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 TRIB2Q92519 343 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 DACH2Q96NX9 599 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 SMIM14Q96QK8 99 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 SEMA3CQ99985 751 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 POPDC3Q9HBV1 291 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.17□□□□□ -0.46
PCM1-203ENST00000517545 RRN3P2A6NIE6 340 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 TREHO43280 583 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 NDST3O95803 873 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 MLYCDO95822 493 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 MT-ND2P03891 347 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 CAPN1P07384 714 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 CNPP09543 421 aaKnown RBP12.17□□□□□ -0.46
PCM1-203ENST00000517545 ITGB6P18564 788 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 EIF2DP41214 584 aaKnown RBP12.17□□□□□ -0.46
PCM1-203ENST00000517545 SERPINB10P48595 397 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 CLCA4Q14CN2 919 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 SCD5Q86SK9 330 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 EID3Q8N140 333 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 TMEM86AQ8N2M4 240 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 C10orf111Q8N326 155 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 ARL10Q8N8L6 244 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 GPR150Q8NGU9 434 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 PHF10Q8WUB8 498 aaKnown RBP12.17□□□□□ -0.46
PCM1-203ENST00000517545 CAPSLQ8WWF8 208 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 NCLNQ969V3 563 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 CCDC115Q96NT0 180 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 ASPSCR1Q9BZE9 553 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 SYTL2Q9HCH5 934 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 HEBP1Q9NRV9 189 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 TAS2R13Q9NYV9 303 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 ARVCFO00192 962 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 ARNTLO00327 626 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 CXCR6O00574 342 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 SPNP16150 400 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 HNRNPFP52597 415 aaKnown RBP12.17□□□□□ -0.46
PCM1-203ENST00000517545 MLLT6P55198 1093 aaPredicted RBP12.17□□□□□ -0.46
PCM1-203ENST00000517545 ACOX1Q15067 660 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 SAPCD2Q86UD0 394 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 CYP4Z1Q86W10 505 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 CIR1Q86X95 450 aaPredicted RBP12.17□□□□□ -0.46
PCM1-203ENST00000517545 MSRB3Q8IXL7 192 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 SIDT2Q8NBJ9 832 aaKnown RBP12.17□□□□□ -0.46
PCM1-203ENST00000517545 RHOXF1Q8NHV9 184 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 TRIT1Q9H3H1 467 aaKnown RBP12.17□□□□□ -0.46
PCM1-203ENST00000517545 RIBC2Q9H4K1 309 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 THG1LQ9NWX6 298 aaKnown RBP12.17□□□□□ -0.46
PCM1-203ENST00000517545 SLC25A37Q9NYZ2 338 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 TMEM98Q9Y2Y6 226 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 PCDHGB1Q9Y5G3 927 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 PPP2R3BQ9Y5P8 575 aa12.17□□□□□ -0.46
PCM1-203ENST00000517545 SMIM35A0A1B0GVV1 85 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 FAM47E-STBD1D6RA91 191 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 TBX1O43435 398 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 KATNA1O75449 491 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 KCNK2O95069 426 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 CYP11A1P05108 521 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 S100A1P23297 94 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 RYKP34925 604 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 SLC35A2P78381 396 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 CYP4F3Q08477 520 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 PON2Q15165 354 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 AP5B1Q2VPB7 878 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 THOC7Q6I9Y2 204 aaKnown RBP12.16□□□□□ -0.46
PCM1-203ENST00000517545 LYSMD2Q8IV50 215 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 CHPFQ8IZ52 775 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 OR8J3Q8NGG0 315 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 OR5K1Q8NHB7 308 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 METTL6Q8TCB7 284 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 LGALS12Q96DT0 336 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 CDKN2AIPNLQ96HQ2 116 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 MYOCQ99972 504 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 CD274Q9NZQ7 290 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 FNDC3AQ9Y2H6 1198 aaKnown RBP12.16□□□□□ -0.46
PCM1-203ENST00000517545 STX16O14662 325 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 SLC16A6O15403 523 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 NIPSNAP2O75323 286 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 TSPAN12O95859 305 aa12.16□□□□□ -0.46
PCM1-203ENST00000517545 BMPR1AP36894 532 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms