RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 WNT3AP56704 352 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 KRT33BQ14525 404 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 GSE1Q14687 1217 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 PTCHD3Q3KNS1 767 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 ZNF789Q5FWF6 425 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 DET1Q7L5Y6 550 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 GLT6D1Q7Z4J2 308 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 SLC25A41Q8N5S1 370 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 TTC13Q8NBP0 860 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 OR2L2Q8NH16 312 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 BLOC1S5Q8TDH9 187 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 CPLX3Q8WVH0 158 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 IP6K3Q96PC2 410 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 DHRS4Q9BTZ2 278 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 FAM8A1Q9UBU6 413 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 CAPN11Q9UMQ6 739 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 NENFQ9UMX5 172 aa15.31■□□□□ 0.04
LMNA-223ENST00000515459 GSAPA4D1B5 854 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 GAPDHSO14556 408 aaPredicted RBP15.3■□□□□ 0.04
LMNA-223ENST00000515459 BUD23O43709 281 aaKnown RBP15.3■□□□□ 0.04
LMNA-223ENST00000515459 HBQ1P09105 142 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 PYGMP11217 842 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 AGXTP21549 392 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 OTX2P32243 289 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 CHRNA4P43681 627 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 DYNLT1P63172 113 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 MESDQ14696 234 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 LYPLAL1Q5VWZ2 237 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 KDELC1Q6UW63 502 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 IGFL3Q6UXB1 125 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 RFX6Q8HWS3 928 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 ZNF398Q8TD17 642 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 IQCDQ96DY2 449 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 RMDN2Q96LZ7 410 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 FER1L6-AS2Q96M78 137 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 PACSIN1Q9BY11 444 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 ILKAPQ9H0C8 392 aaPredicted RBP15.3■□□□□ 0.04
LMNA-223ENST00000515459 LUC7L2Q9Y383 392 aaKnown RBP15.3■□□□□ 0.04
LMNA-223ENST00000515459 HEBP2Q9Y5Z4 205 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 CELSR2Q9HCU4 2923 aa15.3■□□□□ 0.04
LMNA-223ENST00000515459 E7EQ34 232 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 F5H423 210 aaPredicted RBP15.29■□□□□ 0.04
LMNA-223ENST00000515459 GOLGA6L22H0YM25 854 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 KLHL41O60662 606 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 MBD3O95983 291 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 POLBP06746 335 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 ST6GAL1P15907 406 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 NFKB1P19838 968 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 PRDX3P30048 256 aaKnown RBP15.29■□□□□ 0.04
LMNA-223ENST00000515459 CD68P34810 354 aaPredicted RBP15.29■□□□□ 0.04
LMNA-223ENST00000515459 PBX1P40424 430 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 HADHAP40939 763 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 PRKD1Q15139 912 aaPredicted RBP15.29■□□□□ 0.04
LMNA-223ENST00000515459 SLC1A5Q15758 541 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 BZW1Q7L1Q6 419 aaKnown RBP15.29■□□□□ 0.04
LMNA-223ENST00000515459 MRGPREQ86SM8 312 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 CLEC1AQ8NC01 280 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 ACVR1CQ8NER5 493 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 LCN9Q8WX39 176 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 MRGPRX2Q96LB1 330 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 LINC00615Q96LM1 132 aaPredicted RBP15.29■□□□□ 0.04
LMNA-223ENST00000515459 RANBP9Q96S59 729 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 SRMSQ9H3Y6 488 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 COPG1Q9Y678 874 aaKnown RBP15.29■□□□□ 0.04
LMNA-223ENST00000515459 CRYBG3Q68DQ2 2970 aa15.29■□□□□ 0.04
LMNA-223ENST00000515459 CCDC88CQ9P219 2028 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 STX7O15400 261 aaKnown RBP15.28■□□□□ 0.04
LMNA-223ENST00000515459 ZNF749O43361 778 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 KLF7O75840 302 aaPredicted RBP15.28■□□□□ 0.04
LMNA-223ENST00000515459 IPO13O94829 963 aaKnown RBP15.28■□□□□ 0.04
LMNA-223ENST00000515459 PRAMEF1O95521 474 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 IGHEP01854 428 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 KRT1P04264 644 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 TNFRSF8P28908 595 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 NR2C2P49116 596 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 LMAN1P49257 510 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 SSPNQ14714 243 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 MYBPC3Q14896 1274 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 BCL7AQ4VC05 210 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 ODF2Q5BJF6 829 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 C1QL3Q5VWW1 255 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 ZNF385CQ66K41 422 aaPredicted RBP15.28■□□□□ 0.04
LMNA-223ENST00000515459 CFAP206Q8IYR0 622 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 GALNT16Q8N428 558 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 IPMKQ8NFU5 416 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 NAT14Q8WUY8 206 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 TFB1MQ8WVM0 346 aaKnown RBP15.28■□□□□ 0.04
LMNA-223ENST00000515459 TM9SF4Q92544 642 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 RNF25Q96BH1 459 aaPredicted RBP15.28■□□□□ 0.04
LMNA-223ENST00000515459 C17orf62Q9BQA9 187 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 CCM2Q9BSQ5 444 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 PITPNM3Q9BZ71 974 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 KLHL8Q9P2G9 620 aaPredicted RBP15.28■□□□□ 0.04
LMNA-223ENST00000515459 SEC16AO15027 2179 aa15.28■□□□□ 0.04
LMNA-223ENST00000515459 BTN3A3O00478 584 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 PEX12O00623 359 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 LDB2O43679 373 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 WASHC5Q12768 1159 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 MPP3Q13368 585 aa15.27■□□□□ 0.04
LMNA-223ENST00000515459 PTPRCAPQ14761 206 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms