RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 NR1D2Q14995 579 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 RPE65Q16518 533 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 TYSND1Q2T9J0 566 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 KHDC1Q4VXA5 237 aaKnown RBP7.31□□□□□ -1.24
NR1I3-231ENST00000512340 PLEKHS1Q5SXH7 462 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.31□□□□□ -1.24
NR1I3-231ENST00000512340 PHF19Q5T6S3 580 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 DUPD1Q68J44 220 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 WDR74Q6RFH5 385 aaPredicted RBP7.31□□□□□ -1.24
NR1I3-231ENST00000512340 CCNI2Q6ZMN8 369 aaPredicted RBP7.31□□□□□ -1.24
NR1I3-231ENST00000512340 ZNF534Q76KX8 674 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 OOSP2Q86WS3 158 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 CILP2Q8IUL8 1156 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 ZNF547Q8IVP9 402 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 MMGT1Q8N4V1 131 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 CLDN19Q8N6F1 224 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 DCBLD1Q8N8Z6 715 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 ACVR1CQ8NER5 493 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 OR4D9Q8NGE8 314 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 WDR36Q8NI36 951 aaKnown RBP7.31□□□□□ -1.24
NR1I3-231ENST00000512340 CCDC97Q96F63 343 aaPredicted RBP7.31□□□□□ -1.24
NR1I3-231ENST00000512340 CFAP36Q96G28 342 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 VPS39Q96JC1 886 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 SIGLEC10Q96LC7 697 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 ZNF778Q96MU6 729 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 FERD3LQ96RJ6 166 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 RAB11FIP5Q9BXF6 653 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 WWP1Q9H0M0 922 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 TRIT1Q9H3H1 467 aaKnown RBP7.31□□□□□ -1.24
NR1I3-231ENST00000512340 COG4Q9H9E3 785 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 SLC40A1Q9NP59 571 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 TOR4AQ9NXH8 423 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 ZFATQ9P243 1243 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 KLHL42Q9P2K6 505 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 SLC23A2Q9UGH3 650 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 FBXO5Q9UKT4 447 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 ASF1AQ9Y294 204 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 PLEKHM1Q9Y4G2 1056 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 SCN8AQ9UQD0 1980 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 SPEGQ15772 3267 aa7.31□□□□□ -1.24
NR1I3-231ENST00000512340 ACACAQ13085 2346 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 ZNF106Q9H2Y7 1883 aaKnown RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 IGHV1OR21-1A0A087WYE8 117 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 LY6G6EA0A0G2JKS1 128 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 A6NCN8 305 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 NTN3O00634 580 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 PPM1DO15297 605 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 TOX3O15405 576 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 GPR39O43194 453 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 UBXN7O94888 489 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CBSLP0DN79 551 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 MYF5P13349 255 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 ENO3P13929 434 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 PKMP14618 531 aaKnown RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 IVDP26440 423 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 MAP4P27816 1152 aaKnown RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 ATP5DP30049 168 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 FMO4P31512 558 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CCKBRP32239 447 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 STX2P32856 288 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 SHMT2P34897 504 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CBSP35520 551 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CCNFP41002 786 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 ELK3P41970 407 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 ARCN1P48444 511 aaKnown RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CDKN1CP49918 316 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 SLC12A2P55011 1212 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 OR1D5P58170 312 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 UBE2IP63279 158 aaKnown RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 B4GALNT1Q00973 533 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 GUCY2DQ02846 1103 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 HSPA14Q0VDF9 509 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CUL1Q13616 776 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 ISXQ2M1V0 245 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 HSP90AA5PQ58FG0 334 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 PERM1Q5SV97 790 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CDCP2Q5VXM1 449 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 KCTD16Q68DU8 428 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 TMEM71Q6P5X7 295 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CES3Q6UWW8 571 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 UNC5DQ6UXZ4 953 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 C11orf96Q7Z7L8 435 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 PDZD3Q86UT5 571 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CCDC25Q86WR0 208 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 IFT20Q8IY31 132 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 TBC1D21Q8IYX1 336 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 ZBED8Q8IZ13 594 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CARFQ8N187 725 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 FBXO39Q8N4B4 442 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 AGBL5Q8NDL9 886 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 LCN9Q8WX39 176 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 NCSTNQ92542 709 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 TFGQ92734 400 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 SLC22A18Q96BI1 424 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CERS2Q96G23 380 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 LIN37Q96GY3 246 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CD180Q99467 661 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 SRMSQ9H3Y6 488 aa7.3□□□□□ -1.24
NR1I3-231ENST00000512340 CCDC86Q9H6F5 360 aaKnown RBP7.3□□□□□ -1.24
NR1I3-231ENST00000512340 KIR3DX1Q9H7L2 352 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms