RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 COPG2Q9UBF2 871 aa4.36□□□□□ -1.71
PDE4D-220ENST00000512069 POLG2Q9UHN1 485 aa4.36□□□□□ -1.71
PDE4D-220ENST00000512069 CLIC4Q9Y696 253 aa4.36□□□□□ -1.71
PDE4D-220ENST00000512069 PIAS3Q9Y6X2 628 aa4.36□□□□□ -1.71
PDE4D-220ENST00000512069 A0A1W2PP11 408 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 PRSS47A8MTI9 375 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 SOCS5O75159 536 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 GM2AP17900 193 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 POLR2CP19387 275 aaPredicted RBP4.35□□□□□ -1.71
PDE4D-220ENST00000512069 TIMP3P35625 211 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 TAS2R40P59535 323 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 TFAP4Q01664 338 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 NAB2Q15742 525 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 PMS2CLQ68D20 193 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 NCEH1Q6PIU2 408 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 GLDNQ6ZMI3 551 aaPredicted RBP4.35□□□□□ -1.71
PDE4D-220ENST00000512069 PLEKHM3Q6ZWE6 761 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 LRRC8CQ8TDW0 803 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 SCRN2Q96FV2 425 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 POLR3CQ9BUI4 534 aaPredicted RBP4.35□□□□□ -1.71
PDE4D-220ENST00000512069 CHMP4BQ9H444 224 aaKnown RBP4.35□□□□□ -1.71
PDE4D-220ENST00000512069 ZNF69Q9UC07 566 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 STK39Q9UEW8 545 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 TCF19Q9Y242 345 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 NCAPD2Q15021 1401 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 SCN7AQ01118 1682 aa4.35□□□□□ -1.71
PDE4D-220ENST00000512069 GREB1LQ9C091 1923 aaPredicted RBP4.34□□□□□ -1.71
PDE4D-220ENST00000512069 KANSL1LA0AUZ9 987 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 LIPT2A6NK58 231 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 ATP2A1O14983 1001 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 SYNGR3O43761 229 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 PAX1P15863 534 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 NFKBIAP25963 317 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 CDKN1AP38936 164 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 GLIPR1P48060 266 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 RPL24P83731 157 aaKnown RBP4.34□□□□□ -1.71
PDE4D-220ENST00000512069 RUNX1T1Q06455 604 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 RBM39Q14498 530 aaKnown RBP4.34□□□□□ -1.71
PDE4D-220ENST00000512069 LRIF1Q5T3J3 769 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 STXBP5Q5T5C0 1151 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 NSUN5P2Q63ZY6 315 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 OR7E24Q6IFN5 339 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 FAM171BQ6P995 826 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 SARM1Q6SZW1 724 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 SLC26A9Q7LBE3 791 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 ATG9AQ7Z3C6 839 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 ADSSL1Q8N142 457 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 SLC38A9Q8NBW4 561 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 SLC24A4Q8NFF2 622 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 OR1J2Q8NGS2 313 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 HM13Q8TCT9 377 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 TMEM255BQ8WV15 326 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 EGLN2Q96KS0 407 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 DIAPH3Q9NSV4 1193 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 FAM118AQ9NWS6 357 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 HCFC1R1Q9NWW0 138 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 NARFQ9UHQ1 456 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 FBXW11Q9UKB1 542 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 SOS1Q07889 1333 aaPredicted RBP4.34□□□□□ -1.71
PDE4D-220ENST00000512069 A0A1W2PP64 1363 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 KIF26BQ2KJY2 2108 aa4.34□□□□□ -1.71
PDE4D-220ENST00000512069 A0A087X0M5 115 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 A0A1B0GX30 115 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 EIF4E1BA6NMX2 242 aaKnown RBP4.33□□□□□ -1.72
PDE4D-220ENST00000512069 ERVV-2B6SEH9 535 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 F5H0A9 414 aaPredicted RBP4.33□□□□□ -1.72
PDE4D-220ENST00000512069 FAM72CH0Y354 149 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 EPB41L2O43491 1005 aaKnown RBP4.33□□□□□ -1.72
PDE4D-220ENST00000512069 SLC22A3O75751 556 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 TBX18O95935 607 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 CD4P01730 458 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 IGHV4-39P01824 125 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 HIST1H2ABP04908 130 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 ICAM1P05362 532 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 HIST1H2ADP20671 130 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 CHMP24386 653 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 PLIN5Q00G26 463 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 CDC16Q13042 620 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 PDE1CQ14123 709 aaPredicted RBP4.33□□□□□ -1.72
PDE4D-220ENST00000512069 RRS1Q15050 365 aaKnown RBP4.33□□□□□ -1.72
PDE4D-220ENST00000512069 CCDC6Q16204 474 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 OTUD3Q5T2D3 398 aaPredicted RBP4.33□□□□□ -1.72
PDE4D-220ENST00000512069 FAM72AQ5TYM5 149 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 PLA2G4FQ68DD2 849 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 FAM72DQ6L9T8 149 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 PRR5LQ6MZQ0 368 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 ZNF449Q6P9G9 518 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 OLFM4Q6UX06 510 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 HIST3H2AQ7L7L0 130 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 PXKQ7Z7A4 578 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 SDCCAG8Q86SQ7 713 aaPredicted RBP4.33□□□□□ -1.72
PDE4D-220ENST00000512069 FAM72BQ86X60 149 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 PPHLN1Q8NEY8 458 aaKnown RBP4.33□□□□□ -1.72
PDE4D-220ENST00000512069 OR8K5Q8NH50 307 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 UTP15Q8TED0 518 aaKnown RBP4.33□□□□□ -1.72
PDE4D-220ENST00000512069 SLC38A5Q8WUX1 472 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 SLC44A1Q8WWI5 657 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 DUX3Q96PT4 197 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 LRMDAQ9H2I8 198 aa4.33□□□□□ -1.72
PDE4D-220ENST00000512069 PRO3102Q9H379 93 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms