RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 A0A1B0GTL3 188 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 SMTNL1A8MU46 457 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 PCDH17O14917 1159 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 KCNN4O15554 427 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 CCDC172P0C7W6 258 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 AGAP20933 346 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 CDK11BP21127 795 aaKnown RBP11.22□□□□□ -0.61
RNF4-216ENST00000511859 KLK7P49862 253 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.22□□□□□ -0.61
RNF4-216ENST00000511859 KHDC1Q4VXA5 237 aaKnown RBP11.22□□□□□ -0.61
RNF4-216ENST00000511859 CCDC122Q5T0U0 273 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 IRAK1BP1Q5VVH5 260 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 PRAMEF13Q5VWM6 474 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 METRNLQ641Q3 311 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 FBXO38Q6PIJ6 1188 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 GAS2L3Q86XJ1 694 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 GPR135Q8IZ08 494 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 GDAP1Q8TB36 358 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 CNDP1Q96KN2 507 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 PPM1MQ96MI6 270 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 TSGA13Q96PP4 275 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 AP1M1Q9BXS5 423 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 HSD3B7Q9H2F3 369 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 KIR3DX1Q9H7L2 352 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 TAB2Q9NYJ8 693 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 NDOR1Q9UHB4 597 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 SLC24A2Q9UI40 661 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 POMT2Q9UKY4 750 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 SHOC2Q9UQ13 582 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 COLEC10Q9Y6Z7 277 aa11.22□□□□□ -0.61
RNF4-216ENST00000511859 NCOA6Q14686 2063 aaPredicted RBP11.22□□□□□ -0.61
RNF4-216ENST00000511859 ACANP16112 2415 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 TRGV8A0A0C4DH27 118 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 CCDC66A2RUB6 948 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 GOLGA6L19H0YKK7 550 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 CCL21O00585 134 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 EPHB6O15197 1021 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 DDX3YO15523 660 aaKnown RBP11.21□□□□□ -0.61
RNF4-216ENST00000511859 CBSLP0DN79 551 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 HOXB4P17483 251 aaPredicted RBP11.21□□□□□ -0.61
RNF4-216ENST00000511859 POLR2CP19387 275 aaPredicted RBP11.21□□□□□ -0.61
RNF4-216ENST00000511859 IL1R2P27930 398 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 CBSP35520 551 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 DCDP81605 110 aaKnown RBP11.21□□□□□ -0.61
RNF4-216ENST00000511859 GALNT2Q10471 571 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 GALNT3Q14435 633 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 PRKD1Q15139 912 aaPredicted RBP11.21□□□□□ -0.61
RNF4-216ENST00000511859 IFI16Q16666 785 aaKnown RBP11.21□□□□□ -0.61
RNF4-216ENST00000511859 SMTNL2Q2TAL5 461 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 FKBP15Q5T1M5 1219 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 CDKAL1Q5VV42 579 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 RHBDD2Q6NTF9 364 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 TMEM207Q6UWW9 146 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 PPP1R32Q7Z5V6 425 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 ANKRD20A12PQ8NF67 263 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 OR4E2Q8NGC2 313 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 PROKR1Q8TCW9 393 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 HSPH1Q92598 858 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 LMF1Q96S06 567 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 SRPK1Q96SB4 655 aaKnown RBP11.21□□□□□ -0.61
RNF4-216ENST00000511859 INSM2Q96T92 566 aaPredicted RBP11.21□□□□□ -0.61
RNF4-216ENST00000511859 GPR63Q9BZJ6 419 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 ZCCHC2Q9C0B9 1178 aaKnown RBP11.21□□□□□ -0.61
RNF4-216ENST00000511859 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.21□□□□□ -0.61
RNF4-216ENST00000511859 IFT80Q9P2H3 777 aaPredicted RBP11.21□□□□□ -0.61
RNF4-216ENST00000511859 TMPRSS11EQ9UL52 423 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 ACSL5Q9ULC5 683 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 ABCA4P78363 2273 aa11.21□□□□□ -0.61
RNF4-216ENST00000511859 GTF3C1Q12789 2109 aa11.21□□□□□ -0.62
RNF4-216ENST00000511859 KLHL33A6NCF5 533 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 MASP2O00187 686 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 HLA-DQB2P05538 268 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 TPM2P07951 284 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 MMP2P08253 660 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 RARAP10276 462 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 HLA-DPA1P20036 260 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 NDUFS1P28331 727 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 PRDX3P30048 256 aaKnown RBP11.2□□□□□ -0.62
RNF4-216ENST00000511859 CD86P42081 329 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 TDGF1P3P51864 188 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 KCNK10P57789 538 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 KRTAP10-9P60411 292 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 NFE2L1Q14494 772 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 KRT31Q15323 416 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 ATP13A5Q4VNC0 1218 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 MRPL14Q6P1L8 145 aaKnown RBP11.2□□□□□ -0.62
RNF4-216ENST00000511859 TMEM220Q6QAJ8 160 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 GFRALQ6UXV0 394 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 NEK11Q8NG66 645 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 DTX3LQ8TDB6 740 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 N4BP2L2Q92802 583 aaPredicted RBP11.2□□□□□ -0.62
RNF4-216ENST00000511859 ZNF653Q96CK0 615 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 C12orf66Q96MD2 445 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 TRIM56Q9BRZ2 755 aaKnown RBP11.2□□□□□ -0.62
RNF4-216ENST00000511859 PITPNM3Q9BZ71 974 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 TRIM7Q9C029 511 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 LHPPQ9H008 270 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 RBSNQ9H1K0 784 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 PCDH18Q9HCL0 1135 aa11.2□□□□□ -0.62
RNF4-216ENST00000511859 TAS2R14Q9NYV8 317 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms