RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 OR4E2Q8NGC2 313 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 LKAAEAR1Q8TD35 194 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 ELMO1Q92556 727 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 MAGOHBQ96A72 148 aaKnown RBP12.95□□□□□ -0.34
RNF4-215ENST00000511843 ZDHHC12Q96GR4 267 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 PBKQ96KB5 322 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 OR6C1Q96RD1 312 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 OSBPL9Q96SU4 736 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 TRIM56Q9BRZ2 755 aaKnown RBP12.95□□□□□ -0.34
RNF4-215ENST00000511843 HGH1Q9BTY7 390 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 B3GNT4Q9C0J1 378 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 VPS37BQ9H9H4 285 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 FBXO8Q9NRD0 319 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 HRASLS2Q9NWW9 162 aa12.95□□□□□ -0.34
RNF4-215ENST00000511843 KLHL33A6NCF5 533 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 OR5K3A6NET4 321 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 IQCF5A8MTL0 148 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 PGRMC1O00264 195 aaKnown RBP12.94□□□□□ -0.34
RNF4-215ENST00000511843 POLR1CO15160 346 aaPredicted RBP12.94□□□□□ -0.34
RNF4-215ENST00000511843 ATXN7O15265 892 aaPredicted RBP12.94□□□□□ -0.34
RNF4-215ENST00000511843 RAD1O60671 282 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 STK17BO94768 372 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 AP2A2O94973 939 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 KRT14P02533 472 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 LIFP15018 202 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 POLR2CP19387 275 aaPredicted RBP12.94□□□□□ -0.34
RNF4-215ENST00000511843 CD82P27701 267 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 NSG1P42857 185 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 KPNA2P52292 529 aaKnown RBP12.94□□□□□ -0.34
RNF4-215ENST00000511843 LAMB3Q13751 1172 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 ITIH4Q14624 930 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 KCNJ11Q14654 390 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 FASTKD1Q53R41 847 aaKnown RBP12.94□□□□□ -0.34
RNF4-215ENST00000511843 PCID2Q5JVF3 399 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 DNTTIP2Q5QJE6 756 aaKnown RBP12.94□□□□□ -0.34
RNF4-215ENST00000511843 CEACAM20Q6UY09 585 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 PACS1Q6VY07 963 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 CACNA2D3Q8IZS8 1091 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 KRT222Q8N1A0 295 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 MPP5Q8N3R9 675 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 IL22RA1Q8N6P7 574 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 KLHL6Q8WZ60 621 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 SLC39A7Q92504 469 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.94□□□□□ -0.342e-6■■■■■ 54.9
RNF4-215ENST00000511843 ASPSCR1Q9BZE9 553 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 RAB33BQ9H082 229 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 XKR8Q9H6D3 395 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 HOMER3Q9NSC5 361 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 TREX1Q9NSU2 369 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 EPHA6Q9UF33 1036 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 PILRAQ9UKJ1 303 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 RIMKLBQ9ULI2 386 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 PCDHGA4Q9Y5G9 962 aa12.94□□□□□ -0.34
RNF4-215ENST00000511843 BHMG1C9JSJ3 638 aaPredicted RBP12.93□□□□□ -0.34
RNF4-215ENST00000511843 GOLGA8KD6RF30 607 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 GOLGA8TH3BQL2 631 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 GOLGA8MH3BSY2 632 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 IFRD1O00458 451 aaPredicted RBP12.93□□□□□ -0.34
RNF4-215ENST00000511843 ZSCAN12O43309 604 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 TMEM63AO94886 807 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 TIAF1O95411 115 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 FTH1P02794 183 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 F7P08709 466 aaPredicted RBP12.93□□□□□ -0.34
RNF4-215ENST00000511843 EBLN1P0CF75 366 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 FOLR1P15328 257 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 TPSB2P20231 275 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 ARNTP27540 789 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 COILP38432 576 aaPredicted RBP12.93□□□□□ -0.34
RNF4-215ENST00000511843 ATP1A2P50993 1020 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 LY6DQ14210 128 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 TPSAB1Q15661 275 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 SYTL3Q4VX76 610 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 TAF1BQ53T94 588 aaPredicted RBP12.93□□□□□ -0.34
RNF4-215ENST00000511843 CCDC137Q6PK04 289 aaKnown RBP12.93□□□□□ -0.34
RNF4-215ENST00000511843 C4orf22Q6V702 233 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 NLRP9Q7RTR0 991 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 OOSP2Q86WS3 158 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 ACVR1CQ8NER5 493 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 OR5AR1Q8NGP9 310 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 SNRNP27Q8WVK2 155 aaKnown RBP12.93□□□□□ -0.34
RNF4-215ENST00000511843 LCN9Q8WX39 176 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 TTC9Q92623 222 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 MFSD3Q96ES6 412 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 TEFMQ96QE5 360 aaKnown RBP12.93□□□□□ -0.34
RNF4-215ENST00000511843 ULBP3Q9BZM4 244 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 SPRY4Q9C004 299 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 IL22Q9GZX6 179 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 CATSPERZQ9NTU4 200 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 BFARQ9NZS9 450 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 PYCARDQ9ULZ3 195 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 HEBP2Q9Y5Z4 205 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 COLEC10Q9Y6Z7 277 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 KALRNO60229 2985 aa12.93□□□□□ -0.34
RNF4-215ENST00000511843 LOC101059948A0A1B0GTJ6 334 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 UBA6A0AVT1 1052 aaPredicted RBP12.92□□□□□ -0.34
RNF4-215ENST00000511843 GSAPA4D1B5 854 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 TLCD2A6NGC4 264 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 BTN3A3O00478 584 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 BTN3A1O00481 513 aa12.92□□□□□ -0.34
RNF4-215ENST00000511843 LIN7AO14910 233 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms