RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 MYBL1P10243 752 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 ITGA3P26006 1051 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 PRKCIP41743 596 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 SOX8P57073 446 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 ZXDCQ2QGD7 858 aaPredicted RBP18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 ZFYVE27Q5T4F4 411 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 MLIPQ5VWP3 458 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 ARMC6Q6NXE6 501 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 CDHR3Q6ZTQ4 885 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 FER1L6-AS2Q96M78 137 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 WDR77Q9BQA1 342 aaPredicted RBP18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 THAP2Q9H0W7 228 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 FAM8A1Q9UBU6 413 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 ANAPC7Q9UJX3 599 aa18.44■□□□□ 0.54
HMGCS1-206ENST00000511774 BTN3A3O00478 584 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 MSL3P1P0C860 447 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 HLA-DPA1P20036 260 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 HADHAP40939 763 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 PPIDQ08752 370 aaKnown RBP18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 GPRC6AQ5T6X5 926 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 C1orf189Q5VU69 101 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 FAM151BQ6UXP7 276 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 B4GALNT4Q76KP1 1039 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 DDHD1Q8NEL9 900 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 BRSK1Q8TDC3 778 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 FAR1Q8WVX9 515 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 TTC25Q96NG3 672 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 AGAP3Q96P47 875 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 TRAPPC9Q96Q05 1148 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 ZNF670Q9BS34 389 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 DHRS4Q9BTZ2 278 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 PITPNM3Q9BZ71 974 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 HAUS2Q9NVX0 235 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 AIPL1Q9NZN9 384 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 COPG2Q9UBF2 871 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 CDYLQ9Y232 598 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 PADI2Q9Y2J8 665 aa18.43■□□□□ 0.54
HMGCS1-206ENST00000511774 CCDC78A2IDD5 438 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 SNRPB2P08579 225 aaKnown RBP18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 EDN3P14138 238 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 PRDX3P30048 256 aaKnown RBP18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 SSR1P43307 286 aaKnown RBP18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 TAS2R40P59535 323 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 ADCY2Q08462 1091 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 SLC9A5Q14940 896 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 FNBP1LQ5T0N5 605 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 DET1Q7L5Y6 550 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 DAAM2Q86T65 1068 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 NT5DC3Q86UY8 548 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 ZFPM2Q8WW38 1151 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 ITLN2Q8WWU7 325 aaPredicted RBP18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 TRIM11Q96F44 468 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 IP6K3Q96PC2 410 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 GBP5Q96PP8 586 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 DPH2Q9BQC3 489 aaPredicted RBP18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 FAM60AQ9NP50 221 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 IP6K2Q9UHH9 426 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 ITGB1BP2Q9UKP3 347 aa18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 DNMT3AQ9Y6K1 912 aaPredicted RBP18.42■□□□□ 0.54
HMGCS1-206ENST00000511774 NIPBLQ6KC79 2804 aaeCLIP18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 GSAPA4D1B5 854 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 E7EQ34 232 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 BTN3A1O00481 513 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 BUD23O43709 281 aaKnown RBP18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 SGTAO43765 313 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 IPO13O94829 963 aaKnown RBP18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 NDST3O95803 873 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 MX2P20592 715 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 HMGCLP35914 325 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 FOLR3P41439 243 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 TSFMP43897 325 aaKnown RBP18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 IGFL2Q6UWQ7 119 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 PLD5Q8N7P1 536 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 OR2Y1Q8NGV0 311 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 PPP4R1Q8TF05 950 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 TM9SF4Q92544 642 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 SLX1AQ9BQ83 275 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 SLC25A51Q9H1U9 297 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 UBP1Q9NZI7 540 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 IL17CQ9P0M4 197 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 SERTAD3Q9UJW9 196 aa18.41■□□□□ 0.54
HMGCS1-206ENST00000511774 HEATR9A2RTY3 570 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 MGAT4DA6NG13 374 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 PEX12O00623 359 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 PMPCBO75439 489 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 AGXTP21549 392 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 GABRA4P48169 554 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 KLHL30Q0D2K2 578 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 PTPRCAPQ14761 206 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 DEFB110Q30KQ9 67 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 LDLRAP1Q5SW96 308 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 KCTD6Q8NC69 237 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 XPO4Q9C0E2 1151 aaKnown RBP18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 SLC7A5P2Q9GIP4 190 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 SPRTNQ9H040 489 aaPredicted RBP18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 CBX8Q9HC52 389 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 SYTL2Q9HCH5 934 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 SLC6A20Q9NP91 592 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 SLC22A11Q9NSA0 550 aa18.4■□□□□ 0.54
HMGCS1-206ENST00000511774 A0A1W2PQJ5 194 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms