RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 IGFBP7Q16270 282 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 BORAQ6PGQ7 559 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 PAQR3Q6TCH7 311 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 RFLNAQ6ZTI6 216 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 RFX8Q6ZV50 586 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 TSPAN33Q86UF1 283 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 TRIM74Q86UV6 250 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 LURAP1LQ8IV03 231 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 PGBD5Q8N414 524 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 PAF1Q8N7H5 531 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 BMPERQ8N8U9 685 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 PDCD6IPQ8WUM4 868 aaKnown RBP6.59□□□□□ -1.35
COPS4-209ENST00000511653 RNF31Q96EP0 1072 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 KIRREL1Q96J84 757 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 PSKH2Q96QS6 385 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 TAAR9Q96RI9 348 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 TEX101Q9BY14 249 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 GSDMCQ9BYG8 508 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 PHPT1Q9NRX4 125 aaPredicted RBP6.59□□□□□ -1.35
COPS4-209ENST00000511653 ANKMY1Q9P2S6 941 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 PCYT1BQ9Y5K3 369 aaPredicted RBP6.59□□□□□ -1.35
COPS4-209ENST00000511653 DIDO1Q9BTC0 2240 aaKnown RBP6.59□□□□□ -1.35
COPS4-209ENST00000511653 APCP25054 2843 aa6.59□□□□□ -1.35
COPS4-209ENST00000511653 GOLGA6CA6NDK9 693 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 GOLGA6BA6NDN3 693 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 NKX2-8O15522 239 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 HTRA2O43464 458 aaPredicted RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 RAD1O60671 282 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 PEX11BO96011 259 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 GOLGA6DP0CG33 693 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 PRKAR1AP10644 381 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 CR2P20023 1033 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 VIPR1P32241 457 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 ACTR1BP42025 376 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 AIF1P55008 147 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 ACTR1AP61163 376 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 MAXP61244 160 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 AP1S1P61966 158 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 IL10RBQ08334 325 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 PLEKHN1Q494U1 663 aaPredicted RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 PPP6R3Q5H9R7 873 aaPredicted RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 ATP1A1-AS1Q5TC04 95 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 ANKS6Q68DC2 871 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 RAET1GQ6H3X3 334 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 DCUN1D2Q6PH85 259 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 Q6ZVL8 140 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 FAM129CQ86XR2 697 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 UNC5BQ8IZJ1 945 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 MCOLN2Q8IZK6 566 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 CACNA2D3Q8IZS8 1091 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 OR4D9Q8NGE8 314 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 SLC37A2Q8TED4 501 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 CTRCQ99895 268 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 AGPAT1Q99943 283 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 DDA1Q9BW61 102 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 B3GNT4Q9C0J1 378 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 ADNPQ9H2P0 1102 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 ZNF71Q9NQZ8 489 aaPredicted RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 ETNK2Q9NVF9 386 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 C14orf119Q9NWQ9 140 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 TRNAU1APQ9NX07 287 aaKnown RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 GOLGA6AQ9NYA3 693 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 AKAP7Q9P0M2 348 aaPredicted RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 PCSK1NQ9UHG2 260 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 CD84Q9UIB8 345 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 SLC17A4Q9Y2C5 497 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 TMEM98Q9Y2Y6 226 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 CELSR1Q9NYQ6 3014 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 SETD2Q9BYW2 2564 aaPredicted RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 SVILO95425 2214 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 LOC101059948A0A1B0GTJ6 334 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 CLEC18AA5D8T8 446 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 EFCAB7A8K855 629 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 TMCO5BA8MYB1 307 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 SOCS5O75159 536 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 LRCH4O75427 683 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 TCF4P15884 667 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 CTPS1P17812 591 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 NR1D1P20393 614 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 PSMA2P25787 234 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 OAS2P29728 719 aaKnown RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 MIPP30301 263 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 CSTF2P33240 577 aaKnown RBP eCLIP6.58□□□□□ -1.36
COPS4-209ENST00000511653 HTR7P34969 479 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 ARL4AP40617 200 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 GPR3P46089 330 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 COPB1P53618 953 aaKnown RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 POLR2LP62875 67 aaKnown RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 NSUN2Q08J23 767 aaKnown RBP eCLIP6.58□□□□□ -1.36
COPS4-209ENST00000511653 MAMLD1Q13495 774 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 TRA2AQ13595 282 aaKnown RBP eCLIP6.58□□□□□ -1.36
COPS4-209ENST00000511653 DPYSQ14117 519 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 RFTN1Q14699 578 aaPredicted RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 CLPPQ16740 277 aaPredicted RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 FKBP15Q5T1M5 1219 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 CLEC18BQ6UXF7 455 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 MARK2Q7KZI7 788 aaKnown RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 TIPARPQ7Z3E1 657 aaKnown RBP6.58□□□□□ -1.36
COPS4-209ENST00000511653 CLEC18CQ8NCF0 446 aa6.58□□□□□ -1.36
COPS4-209ENST00000511653 RTP4Q96DX8 246 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms