RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 RASSF1Q9NS23 344 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 MCM8Q9UJA3 840 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 A0A0G2JN53 185 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 CXorf49A8MYA2 514 aaPredicted RBP8.92□□□□□ -0.98
NEK1-207ENST00000511633 CLDN7O95471 211 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 ZNF8P17098 575 aaPredicted RBP8.92□□□□□ -0.98
NEK1-207ENST00000511633 GNAZP19086 355 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 FECHP22830 423 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 PTPN5P54829 565 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 GRM2Q14416 872 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 PHC3Q8NDX5 983 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 OR2AP1Q8NGE2 309 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 RNASE11Q8TAA1 199 aaKnown RBP8.92□□□□□ -0.98
NEK1-207ENST00000511633 C5orf34Q96MH7 638 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 SPATA2Q9UM82 520 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 HEBP2Q9Y5Z4 205 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.92□□□□□ -0.98
NEK1-207ENST00000511633 CNTN5O94779 1100 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 TYRP14679 529 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 LGALS3BPQ08380 585 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 SLC13A2Q13183 592 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 CCDC92Q53HC0 331 aaPredicted RBP8.92□□□□□ -0.98
NEK1-207ENST00000511633 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.92□□□□□ -0.98
NEK1-207ENST00000511633 PGAM4Q8N0Y7 254 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 ZNF461Q8TAF7 563 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 POF1BQ8WVV4 589 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 IPCEF1Q8WWN9 437 aaPredicted RBP8.92□□□□□ -0.98
NEK1-207ENST00000511633 PMEPA1Q969W9 287 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 RBM18Q96H35 190 aaKnown RBP8.92□□□□□ -0.98
NEK1-207ENST00000511633 CDKN2AIPNLQ96HQ2 116 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 CNPPD1Q9BV87 410 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 RACGAP1Q9H0H5 632 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 TMEM27Q9HBJ8 222 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 C1orf109Q9NX04 203 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 TRPS1Q9UHF7 1281 aa8.92□□□□□ -0.98
NEK1-207ENST00000511633 CFAP20Q9Y6A4 193 aaKnown RBP8.92□□□□□ -0.98
NEK1-207ENST00000511633 B4DGG1 531 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 DNM1LO00429 736 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 PIRO00625 290 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 KPNA4O00629 521 aaPredicted RBP8.91□□□□□ -0.98
NEK1-207ENST00000511633 MFN2O95140 757 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 SOD2P04179 222 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 FAM163BP0C2L3 166 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 LAMP2P13473 410 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 RYKP34925 604 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 RFC2P35250 354 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 MLLT6P55198 1093 aaPredicted RBP8.91□□□□□ -0.98
NEK1-207ENST00000511633 C1QTNF8P60827 252 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 SIM2Q14190 667 aaPredicted RBP8.91□□□□□ -0.98
NEK1-207ENST00000511633 MYLK3Q32MK0 819 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 NDUFAF6Q330K2 333 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 GPR107Q5VW38 600 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 OR10A6Q8NH74 314 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 PCBD2Q9H0N5 130 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 TFB2MQ9H5Q4 396 aaKnown RBP8.91□□□□□ -0.98
NEK1-207ENST00000511633 ARHGEF3Q9NR81 526 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 ZDHHC18Q9NUE0 388 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 ELOVL2Q9NXB9 296 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 ZDHHC3Q9NYG2 299 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 TELO2Q9Y4R8 837 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 PCDHGA11Q9Y5H2 935 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 MAGEB17A8MXT2 336 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 AGPSO00116 658 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 IFNGP01579 166 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 CCNFP41002 786 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 PGDP52209 483 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 CASP9P55211 416 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 RGS8P57771 180 aaPredicted RBP8.91□□□□□ -0.98
NEK1-207ENST00000511633 INCA1Q0VD86 236 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 RAB30Q15771 203 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 FAM174BQ3ZCQ3 159 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 PITRM1Q5JRX3 1037 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 METTL21CQ5VZV1 264 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 B3GNT6Q6ZMB0 384 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 HDDC2Q7Z4H3 204 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 PIM3Q86V86 326 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 CNTD1Q8N815 330 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 FAM47BQ8NA70 645 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 C7orf43Q8WVR3 580 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 RELTQ969Z4 430 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 SIPA1Q96FS4 1042 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 EBF3Q9H4W6 596 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 LEFTY2O00292 366 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 TNFRSF11BO00300 401 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 B3GALT2O43825 422 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 C4BPBP20851 252 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 IGFBP5P24593 272 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 ITGADQ13349 1161 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 UPP1Q16831 310 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 GPR33Q49SQ1 333 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 RPTNQ6XPR3 784 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 ZNF598Q86UK7 904 aaKnown RBP8.91□□□□□ -0.98
NEK1-207ENST00000511633 ZBTB46Q86UZ6 589 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 FAM156AQ8NDB6 213 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 BPIFB1Q8TDL5 484 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 NOL6Q9H6R4 1146 aaKnown RBP8.91□□□□□ -0.98
NEK1-207ENST00000511633 PRDM8Q9NQV8 689 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 KCTD3Q9Y597 815 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 H0YC42 278 aa8.91□□□□□ -0.98
NEK1-207ENST00000511633 K7EPI3 171 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms