RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, human

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-233	ENST00000510756	SYTL3	Q4VX76	610 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	TMEM92	Q6UXU6	159 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	LRRTM4	Q86VH4	590 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	HEATR4	Q86WZ0	1026 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	MAGEC3	Q8TD91	643 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	GANC	Q8TET4	914 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	CLDN23	Q96B33	292 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	RHBDF1	Q96CC6	855 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	FBXL8	Q96CD0	374 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	HIST1H2AH	Q96KK5	128 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	HIST1H2AJ	Q99878	128 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	H2AFJ	Q9BTM1	129 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	BTBD1	Q9H0C5	482 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	ACSL5	Q9ULC5	683 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	TRIM33	Q9UPN9	1127 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	F5	P12259	2224 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756		A0A0G2JND7	137 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	ANTXRL	A6NF34	631 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	NEMP2	A6NFY4	417 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	TNFRSF10C	O14798	259 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	SUPT7L	O94864	414 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	ENO1	P06733	434 aa	Known RBP	12	□□□□□ -0.49
CAST-233	ENST00000510756	EEF1D	P29692	281 aa	Known RBP	12	□□□□□ -0.49
CAST-233	ENST00000510756	TPMT	P51580	245 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	ARHGAP8	P85298	464 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	CLC	Q05315	142 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	PHF21B	Q96EK2	531 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	CCDC138	Q96M89	665 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	CD244	Q9BZW8	370 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	MEAF6	Q9HAF1	191 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	PNPO	Q9NVS9	261 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	TMEM45A	Q9NWC5	275 aa		12	□□□□□ -0.49
CAST-233	ENST00000510756	TCRBV21S2A2	A0A5A6	115 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756		K7ESM1	405 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	E2F3	O00716	465 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	KATNA1	O75449	491 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	APBB3	O95704	486 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	ESRRB	O95718	433 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	MRPL19	P49406	292 aa	Known RBP	11.99	□□□□□ -0.49
CAST-233	ENST00000510756	IDH3A	P50213	366 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	TUBB3	Q13509	450 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	FGL2	Q14314	439 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	KANK2	Q63ZY3	851 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	FOXR1	Q6PIV2	292 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	ATG14	Q6ZNE5	492 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	ACAD11	Q709F0	780 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	UBE2R2	Q712K3	238 aa	Predicted RBP	11.99	□□□□□ -0.49
CAST-233	ENST00000510756	C11orf96	Q7Z7L8	435 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	AGAP11	Q8TF27	550 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	RMDN2	Q96LZ7	410 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	OR2AG1	Q9H205	316 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	CYP4F12	Q9HCS2	524 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	ZDHHC2	Q9UIJ5	367 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	DCTN4	Q9UJW0	460 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	BPTF	Q12830	3046 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	PRR19	A6NJB7	356 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	CACNB4	O00305	520 aa	Predicted RBP	11.99	□□□□□ -0.49
CAST-233	ENST00000510756	GRID2	O43424	1007 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	UGDH	O60701	494 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	WDR47	O94967	919 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	OTC	P00480	354 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	RPN2	P04844	631 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	CHRNG	P07510	517 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	ZNF8	P17098	575 aa	Predicted RBP	11.99	□□□□□ -0.49
CAST-233	ENST00000510756	MPST	P25325	297 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	PRDX6	P30041	224 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	HSD17B2	P37059	387 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	RPIA	P49247	311 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	CTBS	Q01459	385 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	HSPA14	Q0VDF9	509 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	BNIP1	Q12981	228 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	FZD5	Q13467	585 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	GGTA1P	Q4G0N0	100 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756		Q7L0L9	218 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	CAMKK1	Q8N5S9	505 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	FAM136A	Q96C01	138 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	NTMT1	Q9BV86	223 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.99	□□□□□ -0.49
CAST-233	ENST00000510756	LMAN1L	Q9HAT1	526 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	TXLNG	Q9NUQ3	528 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	HEY2	Q9UBP5	337 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	SLC12A4	Q9UP95	1085 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	PDE10A	Q9Y233	779 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	TRAF6	Q9Y4K3	522 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	ST14	Q9Y5Y6	855 aa		11.99	□□□□□ -0.49
CAST-233	ENST00000510756	TBC1D3D	A0A087WVF3	549 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756	TBC1D3I	A0A087WXS9	549 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756	TBC1D3E	A0A087X179	549 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756	TBC1D3K	A0A087X1G2	549 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756	SERTM1	A2A2V5	107 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.98	□□□□□ -0.49
CAST-233	ENST00000510756	ERICH4	A6NGS2	130 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756	TBC1D3L	B9A6J9	549 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756		K7EPI3	171 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756	INPP4B	O15327	924 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756	POP7	O75817	140 aa	Known RBP	11.98	□□□□□ -0.49
CAST-233	ENST00000510756	PCCB	P05166	539 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756	TBC1D3H	P0C7X1	549 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756	UROS	P10746	265 aa		11.98	□□□□□ -0.49
CAST-233	ENST00000510756	ITGB6	P18564	788 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms