RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 KDM4EB2RXH2 506 aaPredicted RBP6.48□□□□□ -1.37
USP53-206ENST00000510737 PRAC2D3DTV9 90 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 PTPN2P17706 415 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 TMOD1P28289 359 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 CCR2P41597 374 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 DPP6P42658 865 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 EFHC1Q5JVL4 640 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 TTC22Q5TAA0 569 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 DSTYKQ6XUX3 929 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 MARCH9Q86YJ5 346 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 PGBD5Q8N414 524 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 SCAIQ8N9R8 606 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 DEPTORQ8TB45 409 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 CSGALNACT1Q8TDX6 532 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 SMARCD2Q92925 531 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 MSANTD3Q96H12 275 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 LRRC3BQ96PB8 259 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 IFT27Q9BW83 186 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 CADM1Q9BY67 442 aaKnown RBP6.48□□□□□ -1.37
USP53-206ENST00000510737 RNF41Q9H4P4 317 aaPredicted RBP6.48□□□□□ -1.37
USP53-206ENST00000510737 C8orf33Q9H7E9 229 aaPredicted RBP6.48□□□□□ -1.37
USP53-206ENST00000510737 LY9Q9HBG7 655 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 MALT1Q9UDY8 824 aa6.48□□□□□ -1.37
USP53-206ENST00000510737 MTCL1Q9Y4B5 1905 aaKnown RBP6.48□□□□□ -1.37
USP53-206ENST00000510737 PCNX2A6NKB5 2137 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 PLXNB3Q9ULL4 1909 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 APC2O95996 2303 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 TRABD2BA6NFA1 517 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 ARL5CA6NH57 179 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 HEPACAM2A8MVW5 462 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 CD59P13987 128 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 BCKDHBP21953 392 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 DLG1Q12959 904 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 PTK2BQ14289 1009 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 UBE2SQ16763 222 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 MCMDC2Q4G0Z9 681 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 PMS2CLQ68D20 193 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 C1orf228Q6PIY5 440 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 ZNF589Q86UQ0 364 aaPredicted RBP6.47□□□□□ -1.37
USP53-206ENST00000510737 RALGPS2Q86X27 583 aaPredicted RBP6.47□□□□□ -1.37
USP53-206ENST00000510737 DEPDC1BQ8WUY9 529 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 SCLT1Q96NL6 688 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 GAD1Q99259 594 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 APOL6Q9BWW8 343 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 CLPBQ9H078 707 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 PSTPIP2Q9H939 334 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 GTSE1Q9NYZ3 720 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 CACNG4Q9UBN1 327 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 ADAM28Q9UKQ2 775 aa6.47□□□□□ -1.37
USP53-206ENST00000510737 URB1O60287 2271 aaKnown RBP6.47□□□□□ -1.37
USP53-206ENST00000510737 SHROOM3Q8TF72 1996 aa6.46□□□□□ -1.37
USP53-206ENST00000510737 SAA2-SAA4A0A096LPE2 208 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 A0A0D9SFI3 127 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 A0A0U1RQJ8 604 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 TMEM247A6NEH6 219 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 LGALS16A8MUM7 142 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 CAPN9O14815 690 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 TIMM23O14925 209 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 CHADO15335 359 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 TADA2AO75478 443 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 PAK4O96013 591 aaPredicted RBP6.46□□□□□ -1.38
USP53-206ENST00000510737 CKMT1AP12532 417 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 GJA1P17302 382 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 DCTDP32321 178 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 KIF5BP33176 963 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 OR1D2P34982 312 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 ACSM2AQ08AH3 577 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 PSMD5Q16401 504 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 CEP55Q53EZ4 464 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 RHBDF2Q6PJF5 856 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 CATSPER4Q7RTX7 472 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 GALNT7Q86SF2 657 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 CEP57Q86XR8 500 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 POC1AQ8NBT0 407 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 OTUD7AQ8TE49 926 aaPredicted RBP6.46□□□□□ -1.38
USP53-206ENST00000510737 TMEM41AQ96HV5 264 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 BRD8Q9H0E9 1235 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 TRPV4Q9HBA0 871 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 FBRSL1Q9HCM7 1045 aaKnown RBP6.46□□□□□ -1.38
USP53-206ENST00000510737 MYH6P13533 1939 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 ZMYM6O95789 1325 aa6.46□□□□□ -1.38
USP53-206ENST00000510737 CACNA1EQ15878 2313 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 MGAQ8IWI9 3026 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 ASCC3Q8N3C0 2202 aaKnown RBP6.45□□□□□ -1.38
USP53-206ENST00000510737 A0A1B0GVM2 712 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 EFCAB8A8MWE9 144 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 XPNPEP2O43895 674 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 SH3BP5O60239 455 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 LMX1BO60663 402 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 ARSAP15289 507 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 DHPSP49366 369 aaPredicted RBP6.45□□□□□ -1.38
USP53-206ENST00000510737 NT5C2P49902 561 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 ADORA2A-AS1P86434 159 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 FCHO2Q0JRZ9 810 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 KARSQ15046 597 aaKnown RBP6.45□□□□□ -1.38
USP53-206ENST00000510737 TMEM268Q5VZI3 342 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 HIST2H2BCQ6DN03 193 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 LIN54Q6MZP7 749 aa6.45□□□□□ -1.38
USP53-206ENST00000510737 TOGARAM2Q6ZUX3 1019 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms