RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 USP1O94782 785 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 LSM8O95777 96 aaKnown RBP10.4□□□□□ -0.74
SNF8-207ENST00000509995 F12P00748 615 aaPredicted RBP10.4□□□□□ -0.74
SNF8-207ENST00000509995 PNMA6AP0CW24 399 aaPredicted RBP10.4□□□□□ -0.74
SNF8-207ENST00000509995 ABOP16442 354 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 CMA1P23946 247 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 MAXP61244 160 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 GALNT3Q14435 633 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 KRTCAP3Q53RY4 240 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 CDHR3Q6ZTQ4 885 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 FAM20CQ8IXL6 584 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 NPWQ8N729 165 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 ASB5Q8WWX0 329 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 CRACR2AQ9BSW2 395 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 UCK2Q9BZX2 261 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 PTGFRNQ9P2B2 879 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 FZD10Q9ULW2 581 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 MRPS2Q9Y399 296 aaKnown RBP10.4□□□□□ -0.74
SNF8-207ENST00000509995 FHOD1Q9Y613 1164 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 FAM227AF5H4B4 570 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 MAP3K7O43318 606 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 GADD45BO75293 160 aaPredicted RBP10.39□□□□□ -0.75
SNF8-207ENST00000509995 OR2B3O76000 313 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 PRAMEF1O95521 474 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 MLYCDO95822 493 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 TSPAN12O95859 305 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 MTHFD1P11586 935 aaKnown RBP10.39□□□□□ -0.75
SNF8-207ENST00000509995 POLR2CP19387 275 aaPredicted RBP10.39□□□□□ -0.75
SNF8-207ENST00000509995 EPHB1P54762 984 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 PRKAA1Q13131 559 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 ZNF658Q5TYW1 1059 aaPredicted RBP10.39□□□□□ -0.75
SNF8-207ENST00000509995 SMYD5Q6GMV2 418 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 SIMC1Q8NDZ2 872 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 LILRB4Q8NHJ6 448 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 SUN3Q8TAQ9 357 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 BRIX1Q8TDN6 353 aaKnown RBP10.39□□□□□ -0.75
SNF8-207ENST00000509995 CPA5Q8WXQ8 436 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 PSMF1Q92530 271 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 GLYATL1Q969I3 302 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 FKBP10Q96AY3 582 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 VPS50Q96JG6 964 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 SPSB2Q99619 263 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 SPATA16Q9BXB7 569 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 PITPNM3Q9BZ71 974 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 TSPAN10Q9H1Z9 355 aaPredicted RBP10.39□□□□□ -0.75
SNF8-207ENST00000509995 WDR54Q9H977 334 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 KCNJ16Q9NPI9 418 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 RASSF1Q9NS23 344 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 SLC22A11Q9NSA0 550 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 TXLNGQ9NUQ3 528 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 IMP3Q9NV31 184 aaKnown RBP10.39□□□□□ -0.75
SNF8-207ENST00000509995 SEPT11Q9NVA2 429 aaKnown RBP10.39□□□□□ -0.75
SNF8-207ENST00000509995 PKD2L2Q9NZM6 624 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 IL17CQ9P0M4 197 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 PSMD13Q9UNM6 376 aa10.39□□□□□ -0.75
SNF8-207ENST00000509995 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.39□□□□□ -0.75
SNF8-207ENST00000509995 CFAP20Q9Y6A4 193 aaKnown RBP10.39□□□□□ -0.75
SNF8-207ENST00000509995 C1orf232A0A0U1RR37 186 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 GSAPA4D1B5 854 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 RGSL1A5PLK6 1076 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 MATN2O00339 956 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 FOXN3O00409 490 aaPredicted RBP10.38□□□□□ -0.75
SNF8-207ENST00000509995 ZSCAN9O15535 394 aaPredicted RBP10.38□□□□□ -0.75
SNF8-207ENST00000509995 MTX2O75431 263 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 ATE1O95260 518 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 WDPCPO95876 746 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 PEX11BO96011 259 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 HPP00738 406 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 RAF1P04049 648 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 SLC9A1P19634 815 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 HLA-DPA1P20036 260 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 CHRNB4P30926 498 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 NDUFA8P51970 172 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 AIF1P55008 147 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 NOMO3P69849 1222 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 RBBP7Q16576 425 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 KHDC1Q4VXA5 237 aaKnown RBP10.38□□□□□ -0.75
SNF8-207ENST00000509995 SCYL2Q6P3W7 929 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 NAPRTQ6XQN6 538 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 TRAPPC5Q8IUR0 188 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 KBTBD2Q8IY47 623 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 CCDC110Q8TBZ0 833 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 LYSMD1Q96S90 227 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 ZSCAN5AQ9BUG6 496 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 RNF32Q9H0A6 362 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 KIR3DX1Q9H7L2 352 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 ZNF160Q9HCG1 818 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 SAMSN1Q9NSI8 373 aaKnown RBP10.38□□□□□ -0.75
SNF8-207ENST00000509995 SLC24A2Q9UI40 661 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 L3MBTL1Q9Y468 752 aa10.38□□□□□ -0.75
SNF8-207ENST00000509995 PHF3Q92576 2039 aaKnown RBP10.38□□□□□ -0.75
SNF8-207ENST00000509995 EEF2KO00418 725 aaKnown RBP10.37□□□□□ -0.75
SNF8-207ENST00000509995 PRRG2O14669 202 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 ZNHIT1O43257 154 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 KLK8O60259 260 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 CDK14O94921 469 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 TPOP07202 933 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 PRR35P0CG20 571 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 PVRP15151 417 aa10.37□□□□□ -0.75
SNF8-207ENST00000509995 FDXRP22570 491 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms