RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 OTUB2Q96DC9 234 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 APIPQ96GX9 242 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 PHACTR3Q96KR7 559 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 INPP4AQ96PE3 977 aaPredicted RBP4.47□□□□□ -1.69
NIPBL-206ENST00000509429 TRAPPC9Q96Q05 1148 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 TWNKQ96RR1 684 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 RANBP9Q96S59 729 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 ABHD1Q96SE0 405 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 DERL2Q9GZP9 239 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 TWSG1Q9GZX9 223 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 HDHD2Q9H0R4 259 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 QRSL1Q9H0R6 528 aaKnown RBP4.47□□□□□ -1.69
NIPBL-206ENST00000509429 MUC13Q9H3R2 512 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 RIMS4Q9H426 269 aaPredicted RBP4.47□□□□□ -1.69
NIPBL-206ENST00000509429 DIABLOQ9NR28 239 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 RBM12Q9NTZ6 932 aaKnown RBP4.47□□□□□ -1.69
NIPBL-206ENST00000509429 C20orf96Q9NUD7 363 aaPredicted RBP4.47□□□□□ -1.69
NIPBL-206ENST00000509429 ANKMY1Q9P2S6 941 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 PI4KBQ9UBF8 816 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 APEX2Q9UBZ4 518 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 CA14Q9ULX7 337 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 STAP1Q9ULZ2 295 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 RNF24Q9Y225 148 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 RUVBL2Q9Y230 463 aaKnown RBP4.47□□□□□ -1.69
NIPBL-206ENST00000509429 SLC9A8Q9Y2E8 581 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 LRP12Q9Y561 859 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 PUS1Q9Y606 427 aaKnown RBP eCLIP4.47□□□□□ -1.69
NIPBL-206ENST00000509429 PSAT1Q9Y617 370 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 UHRF1BP1LA0JNW5 1464 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 SHPRHQ149N8 1683 aa4.47□□□□□ -1.69
NIPBL-206ENST00000509429 QRICH2Q9H0J4 1663 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ADGRB2O60241 1585 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 FRMPD1Q5SYB0 1578 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 IQSEC2Q5JU85 1478 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 A0A0B4J293 547 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 MEX3AA1L020 520 aaKnown RBP4.46□□□□□ -1.7
NIPBL-206ENST00000509429 URADA6NGE7 173 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 PCP4L1A6NKN8 68 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 A8MV72 311 aaPredicted RBP4.46□□□□□ -1.7
NIPBL-206ENST00000509429 E7ENQ6 273 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 TSPAN4O14817 238 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 POLR1CO15160 346 aaPredicted RBP4.46□□□□□ -1.7
NIPBL-206ENST00000509429 SLC16A6O15403 523 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 B4GAT1O43505 415 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ENTPD3O75355 529 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 JRKO75564 520 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 TOM1L1O75674 476 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 BMP15O95972 392 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 FABP1P07148 127 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 OR4E1P0C645 316 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 FDPSP14324 419 aaKnown RBP4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ETS1P14921 441 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 NPR1P16066 1061 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ITGAXP20702 1163 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 CPT2P23786 658 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 APOBEC3AP31941 199 aaPredicted RBP4.46□□□□□ -1.7
NIPBL-206ENST00000509429 RORAP35398 523 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 BMPR1AP36894 532 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 GPR4P46093 362 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 GSTM5P46439 218 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 CAPZA2P47755 286 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 PIK3CGP48736 1102 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 FHITP49789 147 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 SLC26A2P50443 739 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ARFIP2P53365 341 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 SPCS3P61009 180 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 RPS8P62241 208 aaKnown RBP4.46□□□□□ -1.7
NIPBL-206ENST00000509429 SKP1P63208 163 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ST5P78524 1137 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 MAT1AQ00266 395 aaKnown RBP4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF33AQ06730 810 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 IFFO1Q0D2I5 559 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 RASGEF1BQ0VAM2 473 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 GALNT2Q10471 571 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 TEFQ10587 303 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 TRAF2Q12933 501 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ABRQ12979 859 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 TNFAIP1Q13829 316 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 TUBB2AQ13885 445 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 DAG1Q14118 895 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 KARSQ15046 597 aaKnown RBP4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ANGPT1Q15389 498 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 TBCCQ15814 346 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 KLHL40Q2TBA0 621 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 P3H1Q32P28 736 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 BCL7AQ4VC05 210 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ZC2HC1CQ53FD0 456 aaPredicted RBP4.46□□□□□ -1.7
NIPBL-206ENST00000509429 KLHL26Q53HC5 615 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF311Q5JNZ3 666 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 PLAC9Q5JTB6 97 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 BRMS1LQ5PSV4 323 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 C6orf183Q5T699 404 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 HES5Q5TA89 166 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 KRT80Q6KB66 452 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 CYP20A1Q6UW02 462 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 FRA10AC1Q70Z53 315 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 H1FNTQ75WM6 255 aaPredicted RBP4.46□□□□□ -1.7
NIPBL-206ENST00000509429 TRPM8Q7Z2W7 1104 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 AMZ2Q86W34 360 aa4.46□□□□□ -1.7
NIPBL-206ENST00000509429 ELMOD2Q8IZ81 293 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms