RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CNTN1Q12860 1018 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 CDH17Q12864 832 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 GPS1Q13098 491 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 PIN1Q13526 163 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 MORF4L2Q15014 288 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 SLC1A5Q15758 541 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 PIP5KL1Q5T9C9 394 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 AGBL4Q5VU57 503 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 TTC27Q6P3X3 843 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 PPP1R21Q6ZMI0 780 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 ESPNLQ6ZVH7 1005 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 B4GALNT4Q76KP1 1039 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 DPPA4Q7L190 304 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 PARS2Q7L3T8 475 aaKnown RBP5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 NLRP9Q7RTR0 991 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 HOOK3Q86VS8 718 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 TRIM69Q86WT6 500 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 CXorf67Q86X51 503 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 KLHL7Q8IXQ5 586 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 AADATQ8N5Z0 425 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 MCUQ8NE86 351 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 DENND6BQ8NEG7 585 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 C1orf162Q8NEQ5 155 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 OR6K2Q8NGY2 324 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 DTX3LQ8TDB6 740 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 BRSK1Q8TDC3 778 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 PDCD6IPQ8WUM4 868 aaKnown RBP5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 GAB3Q8WWW8 586 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 PEX13Q92968 403 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 VOPP1Q96AW1 172 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 ARRDC3Q96B67 414 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 RMDN1Q96DB5 314 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 OXNAD1Q96HP4 312 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 LOXL4Q96JB6 756 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZC3H10Q96K80 434 aaKnown RBP5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 TRIB3Q96RU7 358 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 KRT12Q99456 494 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 ERP44Q9BS26 406 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 C1QTNF7Q9BXJ2 289 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 TSPYL1Q9H0U9 437 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 NEUROG2Q9H2A3 272 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 C10orf88Q9H8K7 445 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 XAB2Q9HCS7 855 aaKnown RBP5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 C2orf42Q9NWW7 574 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 GALNT8Q9NY28 637 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 SMARCAL1Q9NZC9 954 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 RIMKLBQ9ULI2 386 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 DMTF1Q9Y222 760 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 CHKBQ9Y259 395 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 UTP11Q9Y3A2 253 aaKnown RBP5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 FADS3Q9Y5Q0 445 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 CABIN1Q9Y6J0 2220 aa5.47□□□□□ -1.53
HMGB1P44-201ENST00000508597 DOCK9Q9BZ29 2069 aa5.46□□□□□ -1.53
HMGB1P44-201ENST00000508597 RIF1Q5UIP0 2472 aaKnown RBP5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 TBC1D3DA0A087WVF3 549 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 TBC1D3IA0A087WXS9 549 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 TBC1D3EA0A087X179 549 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 TBC1D3KA0A087X1G2 549 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 MAGEB16A2A368 324 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 TBC1D3FA6NER0 549 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 C2orf81A6NN90 581 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 EFCAB8A8MWE9 144 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 PRR5-ARHGAP8B1AHC4 643 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 TBC1D3LB9A6J9 549 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 DNALI1O14645 258 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 LATO43561 262 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 MAGEC1O60732 1142 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 RPP40O75818 363 aaKnown RBP5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 TM7SF2O76062 418 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 APRTP07741 180 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 PDHA1P08559 390 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 TBC1D3HP0C7X1 549 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZSCAN5DPP0CG00 497 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 TEAD1P28347 426 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 GKP32189 559 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 HOXD12P35452 270 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 HMGCLP35914 325 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 MMP12P39900 470 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 NPY2RP49146 381 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 MANFP55145 182 aaKnown RBP5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 BASP1P80723 227 aaKnown RBP5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 ROM1Q03395 351 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 C2orf54Q08AI8 447 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 CALCOCO2Q13137 446 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 SGCGQ13326 291 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 ARHGEF7Q14155 803 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 KCNJ11Q14654 390 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 MYBPC3Q14896 1274 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 PDCD1Q15116 288 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 ELF2Q15723 593 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 SETMARQ53H47 684 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 WDR45BQ5MNZ6 344 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 SYCP2LQ5T4T6 812 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 KIAA0895LQ68EN5 471 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 TBC1D3GQ6DHY5 549 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 TBC1D3CQ6IPX1 549 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 C8orf74Q6P047 294 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 LRRC8BQ6P9F7 803 aa5.46□□□□□ -1.54
HMGB1P44-201ENST00000508597 LPCAT2Q7L5N7 544 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms