RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 OR7G1Q8NGA0 311 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 BSNDQ8WZ55 320 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 PPP1R14AQ96A00 147 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 LGALS12Q96DT0 336 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 MFSD3Q96ES6 412 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 MUS81Q96NY9 551 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 TTYH2Q9BSA4 534 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 IFT27Q9BW83 186 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 TM9SF3Q9HD45 589 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 HPF1Q9NWY4 346 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 HCN2Q9UL51 889 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 TESMINQ9Y4I5 508 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 H3BMQ9 156 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 PER2O15055 1255 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 DCLK1O15075 740 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 TP73O15350 636 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SLC7A4O43246 635 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 HLA-DPB1P04440 258 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 TCEA1P23193 301 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ITGA3P26006 1051 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 VARSP26640 1264 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 GTF2E2P29084 291 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SEMA3AQ14563 771 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SHQ1Q6PI26 577 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 DCLRE1AQ6PJP8 1040 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 RPTNQ6XPR3 784 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 HJURPQ8NCD3 748 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 RFT1Q96AA3 541 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 COG8Q96MW5 612 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SEMA3CQ99985 751 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ACTR6Q9GZN1 396 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 MKRN2Q9H000 416 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ADAM7Q9H2U9 754 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 TBC1D17Q9HA65 648 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SEC14L3Q9UDX4 400 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 MALT1Q9UDY8 824 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SLIT3O75094 1523 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 C17orf102A2RUQ5 167 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ANKRD33BA6NCL7 494 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 FGBP02675 491 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 VTNP04004 478 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 FGF3P11487 239 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 BMP2P12643 396 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 BUD31P41223 144 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 POLR2LP62875 67 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ARF5P84085 180 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 PCBP1Q15365 356 aaKnown RBP eCLIP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SH3PXD2AQ5TCZ1 1133 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 RAB12Q6IQ22 244 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SLC30A10Q6XR72 485 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 TIGD4Q8IY51 512 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 UBQLNLQ8IYU4 475 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 LIX1Q8N485 282 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 LRRC52Q8N7C0 313 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SETD6Q8TBK2 473 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 STYXQ8WUJ0 223 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 NRG4Q8WWG1 115 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 CLP1Q92989 425 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 FUNDC2Q9BWH2 189 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 GON7Q9BXV9 100 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 MAF1Q9H063 256 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 IPPKQ9H8X2 491 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 CAPN10Q9HC96 672 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 SMURF1Q9HCE7 757 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 TREM1Q9NP99 234 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 POLE4Q9NR33 117 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 CKLFQ9UBR5 152 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNHIT2Q9UHR6 403 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ZDHHC2Q9UIJ5 367 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 PTCH2Q9Y6C5 1203 aa7.21□□□□□ -1.26
UBE2D3-224ENST00000508474 ABCC6O95255 1503 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 CXorf49A8MYA2 514 aaPredicted RBP7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 PRRG1O14668 218 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 B4GALT4O60513 344 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 TSPAN3O60637 253 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 HOXD10P28358 340 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 ADRA1BP35368 520 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 CLK3P49761 638 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 CPT1AP50416 773 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 PGDP52209 483 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 PNLIPRP1P54315 467 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 DNAJB13P59910 316 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 GTF2H2Q13888 395 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 FAM76BQ5HYJ3 339 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 GTF2H2CQ6P1K8 395 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 LINGO2Q7L985 606 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 TRMT11Q7Z4G4 463 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 LHFPL3Q86UP9 236 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 IGFN1Q86VF2 1251 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 CFAP206Q8IYR0 622 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 SLC7A5P1Q8MH63 180 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 LINC00471Q8N535 108 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 POMGNT2Q8NAT1 580 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 VANGL1Q8TAA9 524 aaPredicted RBP7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 AKTIPQ9H8T0 292 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF282Q9UDV7 671 aaPredicted RBP7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 PCDHB5Q9Y5E4 795 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 PCDHGB1Q9Y5G3 927 aa7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 ARHGEF28Q8N1W1 1705 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-224ENST00000508474 GABRDO14764 452 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms