RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 TAS2R14Q9NYV8 317 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 DUX4Q9UBX2 424 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF780BQ9Y6R6 833 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 NCOR1O75376 2440 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM8BA6NDV4 472 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 LOC730098B7Z3J9 87 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CILPO75339 1184 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 WDR47O94967 919 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 OAZ2O95190 189 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MATN4O95460 622 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CCNB1P14635 433 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CREB1P16220 341 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ATF6P18850 670 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 FMO4P31512 558 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 IFNGR2P38484 337 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SPAM1P38567 509 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 HNF4AP41235 474 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RXRGP48443 463 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 NR2C2P49116 596 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SERPINB9P50453 376 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 STARD6P59095 220 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MAXP61244 160 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RACK1P63244 317 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MYBPHQ13203 477 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MPP3Q13368 585 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CSHL1Q14406 222 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MBTPS1Q14703 1052 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 PGS1Q32NB8 556 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 FHL5Q5TD97 284 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 HECTD2Q5U5R9 776 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 NEK5Q6P3R8 708 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM184AQ6ZMB5 413 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RBM43Q6ZSC3 357 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TAC4Q86UU9 113 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RETREG3Q86VR2 466 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM173Q86WV6 379 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 FSTL5Q8N475 847 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 HORMAD2Q8N7B1 307 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC197Q8NCU1 140 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZSWIM2Q8NEG5 633 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MDGA1Q8NFP4 955 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZFP28Q8NHY6 868 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SP7Q8TDD2 431 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ATL1Q8WXF7 558 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC74AQ96AQ1 378 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CDADC1Q9BWV3 514 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RACGAP1Q9H0H5 632 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SUV39H2Q9H5I1 410 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MANSC1Q9H8J5 431 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 KCNK13Q9HB14 408 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 FBXW2Q9UKT8 454 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF451Q9Y4E5 1061 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 HS3ST4Q9Y661 456 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 GLYATL1P3A0A0U1RQE8 302 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM150CB9EJG8 249 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 GFRA2O00451 464 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TRAFD1O14545 582 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 AP3D1O14617 1153 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 KMOO15229 486 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF185O15231 689 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 INSIG1O15503 277 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ADAM12O43184 909 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MAP3K6O95382 1288 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CYP1A1P04798 512 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF806P0C7X5 589 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ATP6V1B1P15313 513 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 POU1F1P28069 291 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CHRNB4P30926 498 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TPMTP51580 245 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF135P52742 658 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 UCNP55089 124 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 FUT2Q10981 343 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 DHX34Q14147 1143 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 NCF4Q15080 339 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZMYND11Q15326 602 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ATP13A5Q4VNC0 1218 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 BORAQ6PGQ7 559 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM220Q6QAJ8 160 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RFX8Q6ZV50 586 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 KCNK18Q7Z418 384 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CCNJLQ8IV13 435 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CYP4Z2PQ8N1L4 340 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 OR56A4Q8NGH8 313 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 OR52K1Q8NGK4 314 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 LENG8Q96PV6 779 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TUBGCP5Q96RT8 1024 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CTRCQ99895 268 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CEP41Q9BYV8 373 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 C6orf62Q9GZU0 229 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 OR2AG1Q9H205 316 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MAGEH1Q9H213 219 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 LRIT1Q9P2V4 623 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ADAM21Q9UKJ8 722 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 OR6C74A6NCV1 312 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 C2orf74A8MZ97 194 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 F8VZ95 297 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 H0YIV9 168 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 GYG2O15488 501 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ARHGEF9O43307 516 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms