RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 HEBP2Q9Y5Z4 205 aa20.3■□□□□ 0.84
CLDND1-216ENST00000507944 DDX3YO15523 660 aaKnown RBP20.29■□□□□ 0.84
CLDND1-216ENST00000507944 FTCDO95954 541 aa20.29■□□□□ 0.84
CLDND1-216ENST00000507944 NDUFS1P28331 727 aa20.29■□□□□ 0.84
CLDND1-216ENST00000507944 CDKN1CP49918 316 aaPredicted RBP20.29■□□□□ 0.84
CLDND1-216ENST00000507944 DNASE1L3Q13609 305 aa20.29■□□□□ 0.84
CLDND1-216ENST00000507944 ERV3-1Q14264 604 aa20.29■□□□□ 0.84
CLDND1-216ENST00000507944 ZRANB3Q5FWF4 1079 aa20.29■□□□□ 0.84
CLDND1-216ENST00000507944 TMEM139Q8IV31 216 aa20.29■□□□□ 0.84
CLDND1-216ENST00000507944 TXLNBQ8N3L3 684 aa20.29■□□□□ 0.84
CLDND1-216ENST00000507944 OR4E2Q8NGC2 313 aa20.29■□□□□ 0.84
CLDND1-216ENST00000507944 LRRC40Q9H9A6 602 aa20.29■□□□□ 0.84
CLDND1-216ENST00000507944 ZNF71Q9NQZ8 489 aaPredicted RBP20.29■□□□□ 0.84
CLDND1-216ENST00000507944 NLE1Q9NVX2 485 aaPredicted RBP20.29■□□□□ 0.84
CLDND1-216ENST00000507944 IGLV3-16A0A075B6K0 115 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 TRBV5-4A0A0C4DH59 114 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 H7C0S8 307 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 ZBTB11O95625 1053 aaPredicted RBP20.28■□□□□ 0.84
CLDND1-216ENST00000507944 NTRK1P04629 796 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 ARCN1P48444 511 aaKnown RBP20.28■□□□□ 0.84
CLDND1-216ENST00000507944 KPNA2P52292 529 aaKnown RBP20.28■□□□□ 0.84
CLDND1-216ENST00000507944 KLF1Q13351 362 aaPredicted RBP20.28■□□□□ 0.84
CLDND1-216ENST00000507944 SEPT6Q14141 434 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 TAS2R42Q7RTR8 314 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 SERPINA9Q86WD7 417 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 CT55Q8WUE5 264 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 ABHD17AQ96GS6 310 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 FERD3LQ96RJ6 166 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 R3HDM2Q9Y2K5 976 aaKnown RBP20.28■□□□□ 0.84
CLDND1-216ENST00000507944 PCDHGA6Q9Y5G7 932 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 KCNMB2Q9Y691 235 aa20.28■□□□□ 0.84
CLDND1-216ENST00000507944 A0A0U1RQJ8 604 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 PSMD3O43242 534 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 CREG1O75629 220 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 FURINP09958 794 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 POLR2CP19387 275 aaPredicted RBP20.27■□□□□ 0.84
CLDND1-216ENST00000507944 ACRV1P26436 265 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 GDF10P55107 478 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 TUBB4BP68371 445 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 PRKAA1Q13131 559 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 TUBB2AQ13885 445 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 POU6F1Q14863 301 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 P3H1Q32P28 736 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 TMTC4Q5T4D3 741 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 FBXO38Q6PIJ6 1188 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 MICALCLQ6ZW33 695 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 GAS2L3Q86XJ1 694 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 CARFQ8N187 725 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 ACVR1CQ8NER5 493 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 SLC35B2Q8TB61 432 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 STYXQ8WUJ0 223 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 LCN9Q8WX39 176 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 CDKN2AIPNLQ96HQ2 116 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 PPM1MQ96MI6 270 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 DESI2Q9BSY9 194 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 TMEM121Q9BTD3 319 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 TUBB2BQ9BVA1 445 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 COG4Q9H9E3 785 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 VPS37BQ9H9H4 285 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 POLHQ9Y253 713 aa20.27■□□□□ 0.84
CLDND1-216ENST00000507944 TCRBV7S2A1N4TA0A589 114 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 PIPSLA2A3N6 862 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 CDC14CA4D256 554 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 C21orf140B9A014 251 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 IFRD1O00458 451 aaPredicted RBP20.26■□□□□ 0.83
CLDND1-216ENST00000507944 RECKO95980 971 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 PRSS56P0CW18 603 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 TLE1Q04724 770 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 CACNG1Q06432 222 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 GPR19Q15760 415 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 SKIDA1Q1XH10 827 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 ZNF449Q6P9G9 518 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 TAB3Q8N5C8 712 aaPredicted RBP20.26■□□□□ 0.83
CLDND1-216ENST00000507944 OR8K5Q8NH50 307 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 TWSG1Q9GZX9 223 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 OR52A5Q9H2C5 316 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 SRMSQ9H3Y6 488 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 AKIRIN1Q9H9L7 192 aaPredicted RBP20.26■□□□□ 0.83
CLDND1-216ENST00000507944 KCND1Q9NSA2 647 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 PIH1D1Q9NWS0 290 aaKnown RBP20.26■□□□□ 0.83
CLDND1-216ENST00000507944 SOHLH2Q9NX45 425 aa20.26■□□□□ 0.83
CLDND1-216ENST00000507944 AP2A1O95782 977 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 PDHA2P29803 388 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 CD151P48509 253 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 ZNF658BQ4V348 819 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-216ENST00000507944 FAM199XQ6PEV8 388 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-216ENST00000507944 TMEM135Q86UB9 458 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 PIANPQ8IYJ0 282 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 CLDN19Q8N6F1 224 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 PHC3Q8NDX5 983 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 ZNF501Q96CX3 271 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-216ENST00000507944 HES6Q96HZ4 224 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 ALS2CR12Q96Q35 445 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 C1GALT1Q9NS00 363 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 ANAPC2Q9UJX6 822 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 POMT2Q9UKY4 750 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 BTRCQ9Y297 605 aa20.25■□□□□ 0.83
CLDND1-216ENST00000507944 MED13Q9UHV7 2174 aa20.24■□□□□ 0.83
CLDND1-216ENST00000507944 SLC9B1P1A6NJY1 282 aa20.24■□□□□ 0.83
CLDND1-216ENST00000507944 MATN2O00339 956 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms