RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 VHLP40337 213 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 FASLGP48023 281 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 CD151P48509 253 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 SLC18A1P54219 525 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 PRKD1Q15139 912 aaPredicted RBP7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TLR1Q15399 786 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TCEA2Q15560 299 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 UAP1Q16222 522 aaPredicted RBP7.92□□□□□ -1.14
SCN1A-207ENST00000507401 SOWAHCQ53LP3 525 aaPredicted RBP7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TNFAIP8L3Q5GJ75 292 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TFDP3Q5H9I0 405 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 HENMT1Q5T8I9 393 aaKnown RBP7.92□□□□□ -1.14
SCN1A-207ENST00000507401 HHATQ5VTY9 493 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 BROXQ5VW32 411 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 PDPK2PQ6A1A2 396 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 C11orf63Q6NUN7 778 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TMEM214Q6NUQ4 689 aaKnown RBP7.92□□□□□ -1.14
SCN1A-207ENST00000507401 SPOCD1Q6ZMY3 1216 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TRMT10CQ7L0Y3 403 aaKnown RBP7.92□□□□□ -1.14
SCN1A-207ENST00000507401 RAB11FIP2Q7L804 512 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 GPR155Q7Z3F1 870 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 PIM3Q86V86 326 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 GALNT13Q8IUC8 556 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 SPACA3Q8IXA5 215 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 NAGSQ8N159 534 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 ARHGAP24Q8N264 748 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 FBXO39Q8N4B4 442 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 SNRNP27Q8WVK2 155 aaKnown RBP7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TFB1MQ8WVM0 346 aaKnown RBP7.92□□□□□ -1.14
SCN1A-207ENST00000507401 KCNE4Q8WWG9 221 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 AGAP3Q96P47 875 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 SERPINB12Q96P63 405 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 PLEKHG4BQ96PX9 1271 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 SMIM14Q96QK8 99 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 OR2M4Q96R27 311 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 UBL7Q96S82 380 aaPredicted RBP7.92□□□□□ -1.14
SCN1A-207ENST00000507401 SMC6Q96SB8 1091 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 AGAP2Q99490 1192 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 CMKLR1Q99788 373 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 DPYSL5Q9BPU6 564 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 CENPKQ9BS16 269 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 ZSCAN5AQ9BUG6 496 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 MMADHCQ9H3L0 296 aaPredicted RBP7.92□□□□□ -1.14
SCN1A-207ENST00000507401 GLOD4Q9HC38 313 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TRIM39Q9HCM9 518 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 SAR1AQ9NR31 198 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 CD84Q9UIB8 345 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 ACSL6Q9UKU0 697 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TRHDEQ9UKU6 1024 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 TMEM98Q9Y2Y6 226 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 ST14Q9Y5Y6 855 aa7.92□□□□□ -1.14
SCN1A-207ENST00000507401 OR5K4A6NMS3 321 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 HACD1B0YJ81 288 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 B4DGG1 531 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 NDC80O14777 642 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 HGSO14964 777 aaPredicted RBP7.91□□□□□ -1.14
SCN1A-207ENST00000507401 CASC3O15234 703 aaKnown RBP7.91□□□□□ -1.14
SCN1A-207ENST00000507401 NUAK1O60285 661 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 DNAJC6O75061 913 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 ZWINTO95229 277 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 ASMTLO95671 621 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 ECEL1O95672 775 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 NDST3O95803 873 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 IDO1P14902 403 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 CHN1P15882 459 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 PTPN3P26045 913 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 AK4P27144 223 aaPredicted RBP7.91□□□□□ -1.14
SCN1A-207ENST00000507401 CD1CP29017 333 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 ECHS1P30084 290 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 UGT1A5P35504 534 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 HMGCLP35914 325 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 ACTR1BP42025 376 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 CLCNKAP51800 687 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 TMPRSS3P57727 454 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 DCDC1P59894 354 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 ACTR1AP61163 376 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 CAV1Q03135 178 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 WASHC5Q12768 1159 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 TRA2AQ13595 282 aaKnown RBP eCLIP7.91□□□□□ -1.14
SCN1A-207ENST00000507401 ITGA9Q13797 1035 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 THEMIS2Q5TEJ8 643 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 NPNTQ6UXI9 565 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 ARHGEF18Q6ZSZ5 1173 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 B3GNT8Q7Z7M8 397 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 SLITRK4Q8IW52 837 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 SFTPA2Q8IWL1 248 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 RIBC1Q8N443 379 aaPredicted RBP7.91□□□□□ -1.14
SCN1A-207ENST00000507401 TRAM1L1Q8N609 369 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 Q8N9G6 341 aaPredicted RBP7.91□□□□□ -1.14
SCN1A-207ENST00000507401 DNAJC9Q8WXX5 260 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 EID2BQ96D98 161 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 WBP1Q96G27 269 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 RMDN2Q96LZ7 410 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 FCRL5Q96RD9 977 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 UCN2Q96RP3 112 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 IQCGQ9H095 443 aaKnown RBP7.91□□□□□ -1.14
SCN1A-207ENST00000507401 CARD9Q9H257 536 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 EPB41L1Q9H4G0 881 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 TRABDQ9H4I3 376 aa7.91□□□□□ -1.14
SCN1A-207ENST00000507401 GPAMQ9HCL2 828 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms