RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CXorf40BQ96DE9 158 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 TMEM74Q96NL1 305 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 INSM2Q96T92 566 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 GPR22Q99680 433 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 RBBP8Q99708 897 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 TXLNGYQ9BZA5 131 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 FAM117AQ9C073 453 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 TWSG1Q9GZX9 223 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 OR52A5Q9H2C5 316 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 SMOC1Q9H4F8 434 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 SLC40A1Q9NP59 571 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 MRPL40Q9NQ50 206 aaKnown RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 PPANQ9NQ55 473 aaKnown RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 UTP6Q9NYH9 597 aaKnown RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 OR6C2Q9NZP2 312 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 PDP2Q9P2J9 529 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 GULP1Q9UBP9 304 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 TBC1D29Q9UFV1 150 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 SLC24A2Q9UI40 661 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 PNMA8BQ9ULN7 279 aaPredicted RBP8.28□□□□□ -1.08
PDGFC-205ENST00000506880 VWA7Q9Y334 891 aa8.28□□□□□ -1.08
PDGFC-205ENST00000506880 SPTBN2O15020 2390 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 ANKRD12Q6UB98 2062 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CCDC78A2IDD5 438 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CCDC151A5D8V7 595 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 PDZK1P1A8MUH7 402 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 NTN3O00634 580 aaPredicted RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 GDF9O60383 454 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 FAM155BO75949 473 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 KRT37O76014 449 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 MATN4O95460 622 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CPNE6O95741 557 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 AHSGP02765 367 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CATP04040 527 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 INHBAP08476 426 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 ANKRD34CP0C6C1 535 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 ERVK-10P10266 1014 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 COL6A2P12110 1019 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CHRM3P20309 590 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CCND1P24385 295 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CCKBRP32239 447 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 SHMT2P34897 504 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CARSP49589 748 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 NOVA1P51513 510 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CLCN7P51798 805 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 KPNA2P52292 529 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 PMS2P54278 862 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 SLC12A2P55011 1212 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 EIF3BP55884 814 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 IL2P60568 153 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 NAA20P61599 178 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 SHC2P98077 582 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CDKL1Q00532 357 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 RELAQ04206 551 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 BOP1Q14137 746 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 BRD3Q15059 726 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 SMAD1Q15797 465 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 DEFB133Q30KQ1 61 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CRTC3Q6UUV7 619 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CCDC25Q86WR0 208 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 IGDCC3Q8IVU1 814 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CFAP206Q8IYR0 622 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 ARL14Q8N4G2 192 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 ZBTB2Q8N680 514 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 OR4D9Q8NGE8 314 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 ACMSDQ8TDX5 336 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 SLC37A2Q8TED4 501 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 SLC44A1Q8WWI5 657 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 ATL1Q8WXF7 558 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 TFGQ92734 400 aaPredicted RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 ISL2Q96A47 359 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 RAD51AP1Q96B01 352 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CFAP36Q96G28 342 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 ZDHHC12Q96GR4 267 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 DEPDC7Q96QD5 511 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 WDR83Q9BRX9 315 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 TRIM54Q9BYV2 358 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 ROPN1BQ9BZX4 212 aaPredicted RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 PCBD2Q9H0N5 130 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 TRIT1Q9H3H1 467 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 TCEAL2Q9H3H9 227 aaPredicted RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 CDC42EP4Q9H3Q1 356 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 OSGEPL1Q9H4B0 414 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 ROPN1Q9HAT0 212 aaPredicted RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 PLAC1Q9HBJ0 212 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 RXFP3Q9NSD7 469 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 IARS2Q9NSE4 1012 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 UCKL1Q9NWZ5 548 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 AKAP7Q9P0M2 348 aaPredicted RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 SPATA7Q9P0W8 599 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 SEMA5BQ9P283 1151 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 MARCH4Q9P2E8 410 aaPredicted RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 LRIT1Q9P2V4 623 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 TRMT6Q9UJA5 497 aaKnown RBP8.27□□□□□ -1.09
PDGFC-205ENST00000506880 TMCO1Q9UM00 188 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 NFU1Q9UMS0 254 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 PTPRBP23467 1997 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 SEC16AO15027 2179 aa8.27□□□□□ -1.09
PDGFC-205ENST00000506880 DNAH14Q0VDD8 3507 aa8.26□□□□□ -1.09
PDGFC-205ENST00000506880 LY6G6EA0A0G2JKS1 128 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms