RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 MYLKQ15746 1914 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 COL1A2P08123 1366 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 SCN1AP35498 2009 aa15.65■□□□□ 0.1
SCLT1-208ENST00000506368 C9JVG2 144 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 FGF10O15520 208 aaPredicted RBP15.64■□□□□ 0.09
SCLT1-208ENST00000506368 XPNPEP2O43895 674 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 TSPAN1O60635 241 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 CRYZL1O95825 349 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 S1PR4O95977 384 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 IGFBP5P24593 272 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 HOXD11P31277 338 aaPredicted RBP15.64■□□□□ 0.09
SCLT1-208ENST00000506368 MASP1P48740 699 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 CXCR3P49682 368 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 SEPHS1P49903 392 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 SERPINH1P50454 418 aaKnown RBP15.64■□□□□ 0.09
SCLT1-208ENST00000506368 RAPSNQ13702 412 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 STARD3Q14849 445 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 PFKFB4Q16877 469 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 COLEC12Q5KU26 742 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 MICU2Q8IYU8 434 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 FBXO39Q8N4B4 442 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 PARP16Q8N5Y8 322 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 PAF1Q8N7H5 531 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 ZNF540Q8NDQ6 660 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 APPL2Q8NEU8 664 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 PDLIM5Q96HC4 596 aaKnown RBP15.64■□□□□ 0.09
SCLT1-208ENST00000506368 MRGPRX2Q96LB1 330 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 TEX37Q96LM6 180 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 FDXACB1Q9BRP7 624 aaPredicted RBP15.64■□□□□ 0.09
SCLT1-208ENST00000506368 CLPBQ9H078 707 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 SPATC1LQ9H0A9 340 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 WDCPQ9H6R7 721 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 IL37Q9NZH6 218 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 LIMD1Q9UGP4 676 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 PTGDR2Q9Y5Y4 395 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 CASP8AP2Q9UKL3 1982 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 AIREO43918 545 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 MFN2O95140 757 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 MT-ND2P03891 347 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 ZNF37AP17032 561 aaPredicted RBP15.64■□□□□ 0.09
SCLT1-208ENST00000506368 ALDH4A1P30038 563 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 RRM2P31350 389 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 NRIP1P48552 1158 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 CDKN2DP55273 166 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 PROX2Q3B8N5 592 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 FBXO43Q4G163 708 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 ZNF789Q5FWF6 425 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 TOR1AIP1Q5JTV8 583 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 CES5AQ6NT32 575 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 GDPD3Q7L5L3 318 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 FAM126BQ8IXS8 530 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 LINC01465Q8N7H1 131 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 ZNF548Q8NEK5 533 aaPredicted RBP15.64■□□□□ 0.09
SCLT1-208ENST00000506368 GPRC5AQ8NFJ5 357 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 CNIH3Q8TBE1 160 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 KIAA1191Q96A73 305 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 SIGLEC11Q96RL6 698 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 ATP13A1Q9HD20 1204 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 DDX28Q9NUL7 540 aaKnown RBP15.64■□□□□ 0.09
SCLT1-208ENST00000506368 SLAMF8Q9P0V8 285 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 FNIP2Q9P278 1114 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 TRAPPC4Q9Y296 219 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 PCDHB14Q9Y5E9 798 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 MAU2Q9Y6X3 613 aa15.64■□□□□ 0.09
SCLT1-208ENST00000506368 ELOVL7A1L3X0 281 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 PIRO00625 290 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 SERPINF2P08697 491 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 WARSP23381 471 aaKnown RBP15.63■□□□□ 0.09
SCLT1-208ENST00000506368 MZF1P28698 734 aaPredicted RBP15.63■□□□□ 0.09
SCLT1-208ENST00000506368 NUDT1P36639 197 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 MAP2K4P45985 399 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 SCNN1GP51170 649 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 IST1P53990 364 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 DAOAP59103 153 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 DUSP7Q16829 419 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 SPANXN2Q5MJ10 180 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 ZCCHC8Q6NZY4 707 aaKnown RBP15.63■□□□□ 0.09
SCLT1-208ENST00000506368 SYCE2Q6PIF2 218 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 CCDC81Q6ZN84 652 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 SPERTQ8NA61 448 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 B3GALNT2Q8NCR0 500 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 FLCNQ8NFG4 579 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 GPR150Q8NGU9 434 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 FIG4Q92562 907 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 FAM162AQ96A26 154 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 ZNF668Q96K58 619 aaPredicted RBP15.63■□□□□ 0.09
SCLT1-208ENST00000506368 KCNA7Q96RP8 456 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 GAD1Q99259 594 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 NUAK2Q9H093 628 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 DCAF13Q9NV06 445 aaKnown RBP15.63■□□□□ 0.09
SCLT1-208ENST00000506368 DDIT4Q9NX09 232 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 ERAP1Q9NZ08 941 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 USP22Q9UPT9 525 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 PCDHGB6Q9Y5F9 930 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 PCDHGA3Q9Y5H0 932 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 AXIN1O15169 862 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 CAPN5O15484 640 aaPredicted RBP15.63■□□□□ 0.09
SCLT1-208ENST00000506368 SIX3O95343 332 aaPredicted RBP15.63■□□□□ 0.09
SCLT1-208ENST00000506368 FTH1P02794 183 aa15.63■□□□□ 0.09
SCLT1-208ENST00000506368 FYNP06241 537 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms