RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 KCNA5P22460 613 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 GNLYP22749 145 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 TIA1P31483 386 aaKnown RBP eCLIP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FRKP42685 505 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 KCNJ1P48048 391 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 HNRNPH2P55795 449 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZNF91Q05481 1191 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FOXF2Q12947 444 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 LAMB3Q13751 1172 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 INPP5JQ15735 1006 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 CTF1Q16619 201 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 LRRC73Q5JTD7 316 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 KCNT1Q5JUK3 1230 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ASPHD1Q5U4P2 390 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 PRR27Q6MZM9 219 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 NOTUMQ6P988 496 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 PARM1Q6UWI2 310 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 TMEM182Q6ZP80 229 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 GPR180Q86V85 440 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 NLRP14Q86W24 1093 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZC3HC1Q86WB0 502 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 NRROSQ86YC3 692 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ANKRD13BQ86YJ7 626 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 SIAH3Q8IW03 269 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FAM219AQ8IW50 185 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 CNTN4Q8IWV2 1026 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 PM20D2Q8IYS1 436 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 HDDC3Q8N4P3 179 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 AADATQ8N5Z0 425 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLC5A8Q8N695 610 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 PCDH20Q8N6Y1 951 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 UXS1Q8NBZ7 420 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FAM98AQ8NCA5 519 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ENGASEQ8NFI3 743 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 NCOA7Q8NI08 942 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 THAP6Q8TBB0 222 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 MAGEC3Q8TD91 643 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 PPP4R1Q8TF05 950 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 UBLCP1Q8WVY7 318 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 RAD54LQ92698 747 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 OTUB1Q96FW1 271 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FAM81BQ96LP2 452 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FNDC11Q9BVV2 318 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 POLDIP3Q9BY77 421 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ABCG8Q9H221 673 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 CATSPERBQ9H7T0 1116 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 CLK4Q9HAZ1 481 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 HHATLQ9HCP6 504 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FZD3Q9NPG1 666 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 KLHL1Q9NR64 748 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 MSRB1Q9NZV6 116 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 IL36RNQ9UBH0 155 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FBXL2Q9UKC9 423 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 FBXW2Q9UKT8 454 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 ITM2BQ9Y287 266 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 B3GALT5Q9Y2C3 310 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 PADI2Q9Y2J8 665 aa3.78□□□□□ -1.8
TRAPPC13-208ENST00000505553 C13orf42A0A1B0GVH6 325 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 AP5Z1O43299 807 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 TXNL1O43396 289 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 LDB2O43679 373 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 GH1P01241 217 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 SLC4A1P02730 911 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 FAM200BP0CF97 657 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 SAGP10523 405 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 CYP11B2P19099 503 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 CERS1P27544 350 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 P2RX3P56373 397 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 NME5P56597 212 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 YBEYP58557 167 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 TAS2R38P59533 333 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 SELENOVP59797 346 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 ZP1P60852 638 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 HNRNPKP61978 463 aaKnown RBP eCLIP3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 POLR2LP62875 67 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 SLC10A2Q12908 348 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 TNK1Q13470 666 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 PTPN14Q15678 1187 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 DCAF12L2Q5VW00 463 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 C18orf63Q68DL7 685 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 TXNRD3NBQ6F5E7 133 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 SLC27A1Q6PCB7 646 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 MEPCEQ7L2J0 689 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 TRAPPC11Q7Z392 1133 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 MIER3Q7Z3K6 550 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 FOXP4Q8IVH2 680 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 OR2AJ1Q8NGZ0 328 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 B4GALNT2Q8NHY0 566 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 ZFAND2BQ8WV99 257 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 ST6GALNAC6Q969X2 333 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 CENPTQ96BT3 561 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 MTERF3Q96E29 417 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 NLRP4Q96MN2 994 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 PRAM1Q96QH2 718 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 RUFY1Q96T51 708 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 C16orf70Q9BSU1 422 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 ABCG4Q9H172 646 aa3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 AKIRIN1Q9H9L7 192 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-208ENST00000505553 TBC1D17Q9HA65 648 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms