RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 KCNA5P22460 613 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 KRT20P35900 424 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 GLUD2P49448 558 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 MAP3K7CLP57077 242 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 BCL7AQ4VC05 210 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 ZPBP2Q6X784 338 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 RPS27LQ71UM5 84 aaKnown RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 CNIH3Q8TBE1 160 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 DNAJB14Q8TBM8 379 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 TSGA13Q96PP4 275 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 KCTD15Q96SI1 283 aaPredicted RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 C1QTNF7Q9BXJ2 289 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 ZBTB20Q9HC78 741 aaPredicted RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 GBA2Q9HCG7 927 aaPredicted RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 FAM49BQ9NUQ9 324 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 EXD2Q9NVH0 621 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 CPSF3Q9UKF6 684 aaKnown RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 USP22Q9UPT9 525 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 USP3Q9Y6I4 520 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 HTTP42858 3142 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 IGKV6-21A0A0C4DH24 114 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 A8MT66 165 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 H3BQ06 376 aaPredicted RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 ACKR2O00590 384 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 SLC16A6O15403 523 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 NOBOXO60393 691 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 C22orf31O95567 290 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 AP2A1O95782 977 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 MT-ND2P03891 347 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 SDC4P31431 198 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 PRIM2P49643 509 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 KPNA2P52292 529 aaKnown RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 MBTD1Q05BQ5 628 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 IFRD2Q12894 506 aaPredicted RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 ZNF792Q3KQV3 632 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 CLEC6AQ6EIG7 209 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 SULT1C3Q6IMI6 304 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 BLOC1S3Q6QNY0 202 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 C16orf54Q6UWD8 224 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 MPZL3Q6UWV2 235 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 MFSD6LQ8IWD5 586 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 CARNMT1Q8N4J0 409 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 TMEM199Q8N511 208 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 HEXDCQ8WVB3 486 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 CCDC126Q96EE4 140 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 NSMCE2Q96MF7 247 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 SDHCQ99643 169 aaPredicted RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 RBM4BQ9BQ04 359 aaKnown RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 RBM4Q9BWF3 364 aaKnown RBP13.09□□□□□ -0.31
LETM1-203ENST00000505551 CDADC1Q9BWV3 514 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 MAGEB5Q9BZ81 275 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 ELOVL4Q9GZR5 314 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 CDT1Q9H211 546 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 CYP4F12Q9HCS2 524 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 ACOT13Q9NPJ3 140 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 SETD4Q9NVD3 440 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 TBC1D24Q9ULP9 559 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 EDARQ9UNE0 448 aa13.09□□□□□ -0.31
LETM1-203ENST00000505551 LACTBL1A8MY62 500 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 H3BRB1 525 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 UBFD1O14562 309 aaKnown RBP13.08□□□□□ -0.32
LETM1-203ENST00000505551 DSCR3O14972 297 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 PDPK1O15530 556 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 SCO1O75880 301 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 IPO13O94829 963 aaKnown RBP13.08□□□□□ -0.32
LETM1-203ENST00000505551 SLITRK5O94991 958 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 HOXC6P09630 235 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 SMPD1P17405 629 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 NFYCQ13952 458 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 GLYATQ6IB77 296 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 GPR142Q7Z601 462 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 B3GNT8Q7Z7M8 397 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 RAB43Q86YS6 212 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 LIX1LQ8IVB5 337 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 UBA3Q8TBC4 463 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 ZFAND1Q8TCF1 268 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 SLC2A14Q8TDB8 520 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 SLC7A6Q92536 515 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 GSTO2Q9H4Y5 243 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 SDR39U1Q9NRG7 319 aaPredicted RBP13.08□□□□□ -0.32
LETM1-203ENST00000505551 CCDC59Q9P031 241 aaKnown RBP13.08□□□□□ -0.32
LETM1-203ENST00000505551 BTBD3Q9Y2F9 522 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 TPRKBQ9Y3C4 175 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 A6NCN8 305 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 EEF2KO00418 725 aaKnown RBP13.08□□□□□ -0.32
LETM1-203ENST00000505551 MFSD11O43934 449 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 AHSGP02765 367 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 S100A6P06703 90 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 STMN1P16949 149 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 SOX11P35716 441 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 SLC9A3P48764 834 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 OR4D2P58180 307 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 FAM83EQ2M2I3 478 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 TECRLQ5HYJ1 363 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 TOR2AQ5JU69 321 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 CERCAMQ5T4B2 595 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 ANKRD34AQ69YU3 496 aa13.08□□□□□ -0.32
LETM1-203ENST00000505551 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.08□□□□□ -0.32
LETM1-203ENST00000505551 NRARPQ7Z6K4 114 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms