RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 ANKRD7Q92527 254 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 GLMNQ92990 594 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 CAMK1GQ96NX5 476 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 GPR21Q99679 349 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 CCM2Q9BSQ5 444 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 EDEM2Q9BV94 578 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 NUSAP1Q9BXS6 441 aaKnown RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 ZCCHC2Q9C0B9 1178 aaKnown RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 VPS37BQ9H9H4 285 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 CAB39LQ9H9S4 337 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 PRDM8Q9NQV8 689 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 KLC4Q9NSK0 619 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 NLGN3Q9NZ94 848 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 TAAR2Q9P1P5 351 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 ZNHIT2Q9UHR6 403 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 GNPTGQ9UJJ9 305 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 GMEB2Q9UKD1 530 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 RAB23Q9ULC3 237 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 KCNK6Q9Y257 313 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 VWA7Q9Y334 891 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 COMMD10Q9Y6G5 202 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 KIF26BQ2KJY2 2108 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 UBA6A0AVT1 1052 aaPredicted RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 EME2A4GXA9 379 aaPredicted RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 KRT87PA6NCN2 255 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 OR52A4PA6NMU1 304 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 C4orf47A7E2U8 309 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 EIF3FO00303 357 aaPredicted RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 QSOX1O00391 747 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 LIN7AO14910 233 aaPredicted RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 YKT6O15498 198 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 SIGLEC6O43699 453 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 PRICKLE3O43900 615 aaPredicted RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 GFRA3O60609 400 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 PSIP1O75475 530 aaKnown RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 NDUFS3O75489 264 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 ASMTLO95671 621 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 CER1O95813 267 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 SYPP08247 313 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 OR56A5P0C7T3 313 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 MYF5P13349 255 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 MTHFD2P13995 350 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 ATP5DP30049 168 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 AKT1P31749 480 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 ACTR1BP42025 376 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 ARRB1P49407 418 aaPredicted RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 CCT8P50990 548 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 PDX1P52945 283 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 C21orf59P57076 290 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 ACTR1AP61163 376 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 CFHR1Q03591 330 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 BMPR2Q13873 1038 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 BOP1Q14137 746 aaKnown RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 ELOCQ15369 112 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 TCEA2Q15560 299 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 RPE65Q16518 533 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 DEFB133Q30KQ1 61 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 PLA2G4EQ3MJ16 856 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 CCSMST1Q4G0I0 132 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 PPM1JQ5JR12 505 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 PLEKHS1Q5SXH7 462 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 GRTP1Q5TC63 336 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 STPG1Q5TH74 334 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 FAM45BPQ6NSW5 357 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 DUS1LQ6P1R4 473 aaKnown RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 SLC30A9Q6PML9 568 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 THSD4Q6ZMP0 1018 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 TIFABQ6ZNK6 161 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 CDHR3Q6ZTQ4 885 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 NEK10Q6ZWH5 1172 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 RD3Q7Z3Z2 195 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 SDCCAG8Q86SQ7 713 aaPredicted RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 GLRX5Q86SX6 157 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 PDZD3Q86UT5 571 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 FSTL5Q8N475 847 aaPredicted RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 KYQ8NBH2 561 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 FLVCR1-AS1Q8TAF5 88 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 GDAP1Q8TB36 358 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 FAM45AQ8TCE6 357 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 EPS8L3Q8TE67 593 aaKnown RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 EEF1AKMT1Q8WVE0 214 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 FAM136AQ96C01 138 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 ATXN7L3BQ96GX2 97 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 APOLD1Q96LR9 279 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 ZIM3Q96PE6 472 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 SLC13A1Q9BZW2 595 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 POPDC3Q9HBV1 291 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 SLC40A1Q9NP59 571 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 PPANQ9NQ55 473 aaKnown RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 IGSF5Q9NSI5 407 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 NSMCE4AQ9NXX6 385 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 OGFRQ9NZT2 677 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 SPASTQ9UBP0 616 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 LGALS13Q9UHV8 139 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 SLC24A2Q9UI40 661 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 ADAMTS6Q9UKP5 1117 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 RUVBL2Q9Y230 463 aaKnown RBP4.83□□□□□ -1.64
LMNB1-208ENST00000504788 VPS9D1Q9Y2B5 631 aa4.83□□□□□ -1.64
LMNB1-208ENST00000504788 DNAJC16Q9Y2G8 782 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms