RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 C10orf82Q8WW14 230 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 ERVK-6Q9BXR3 956 aa16.3■□□□□ 0.2
PCDHA1-203ENST00000504120 ARHGEF33A8MVX0 844 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 TP73O15350 636 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 IMPDH1P20839 514 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 CCNFP41002 786 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 STXBP1P61764 594 aaKnown RBP16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 PPIGQ13427 754 aaKnown RBP eCLIP16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 HERC3Q15034 1050 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 GPR33Q49SQ1 333 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 NCBP2-AS2Q69YL0 99 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 MSANTD2Q6P1R3 559 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 NODALQ96S42 347 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 SLC28A3Q9HAS3 691 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 RIIAD1A6NNX1 92 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 MAGEB3O15480 346 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 DHFRP00374 187 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 FOXN2P32314 431 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 WASP42768 502 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 TPGS2Q68CL5 300 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 SCAMP5Q8TAC9 235 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 PIGXQ8TBF5 258 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 PRICKLE1Q96MT3 831 aaPredicted RBP16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 EBPLQ9BY08 206 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 CKLFQ9UBR5 152 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 ARL5AQ9Y689 179 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 XKRYO14609 159 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 IL1R2P27930 398 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 ALDH4A1P30038 563 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 ARFIP1P53367 373 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 IFI44LQ53G44 452 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 UBXN11Q5T124 520 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 SYPL2Q5VXT5 272 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 PRSS55Q6UWB4 352 aaPredicted RBP16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 OR52J3Q8NH60 311 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 RFKQ969G6 155 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 CDADC1Q9BWV3 514 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 OXSMQ9NWU1 459 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 ROBO1Q9Y6N7 1651 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 SAGE2PA6NJ88 616 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 K7EPI3 171 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 MT-ND1P03886 318 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 SLC18A1P54219 525 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 ADGRE1Q14246 886 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 FAM174BQ3ZCQ3 159 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 RNF220Q5VTB9 566 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 KLHL24Q6TFL4 600 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 AHSA2Q719I0 299 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 SAMD14Q8IZD0 417 aaPredicted RBP16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 NSMCE3Q96MG7 304 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 HBEGFQ99075 208 aa16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 ZNF282Q9UDV7 671 aaPredicted RBP16.29■□□□□ 0.2
PCDHA1-203ENST00000504120 PI15O43692 258 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 RPS6KA3P51812 740 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 RABGGTBP53611 331 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 ERVK-8P63133 956 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 ATXN7L2Q5T6C5 722 aaPredicted RBP16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 ANKRD46Q86W74 232 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 LCN9Q8WX39 176 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 ACDQ96AP0 544 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 TAS2R1Q9NYW7 299 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 ASB3Q9Y575 518 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 SLC30A4O14863 429 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 RASGRP1O95267 797 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 RAP2AP10114 183 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 TFPIP10646 304 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 CDH12P55289 794 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 ZDHHC21Q8IVQ6 265 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 TRPV3Q8NET8 790 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 ZNF142P52746 1687 aaPredicted RBP16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 C9P02748 559 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 MNDAP41218 407 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 BLMHQ13867 455 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 OTOP2Q7RTS6 562 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 P2RY8Q86VZ1 359 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 TTC29Q8NA56 475 aaPredicted RBP16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 DCAKDQ8WVC6 231 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 C5orf34Q96MH7 638 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 IL1RAPQ9NPH3 570 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 PDE10AQ9Y233 779 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 LRRC72A6NJI9 287 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 UGT1A9O60656 530 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 NCK1P16333 377 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 CHRNA4P43681 627 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 ARHGAP1Q07960 439 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 IL18R1Q13478 541 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 PLET1Q6UQ28 207 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 AKAP14Q86UN6 197 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 RANBP3LQ86VV4 465 aaPredicted RBP16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 NAT14Q8WUY8 206 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 ZNF514Q96K75 400 aaPredicted RBP16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 LPIN3Q9BQK8 851 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 UGT1A7Q9HAW7 530 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 UGT1A10Q9HAW8 530 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 UGT1A8Q9HAW9 530 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 CIDEBQ9UHD4 219 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 IKZF2Q9UKS7 526 aa16.28■□□□□ 0.2
PCDHA1-203ENST00000504120 MAN2B2Q9Y2E5 1009 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms