RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ACOX3O15254 700 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 C9P02748 559 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 CATP04040 527 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 RFC2P35250 354 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 MINDY1Q8N5J2 469 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC35F5Q8WV83 523 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 NARS2Q96I59 477 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 ZNF224Q9NZL3 707 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 MRPS7Q9Y2R9 242 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 ERN1O75460 977 aaKnown RBP16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 FLT3LGP49771 235 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 APOLD1Q96LR9 279 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 ZNF558Q96NG5 402 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 HEPHQ9BQS7 1158 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 KLHL31Q9H511 634 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 COL1A2P08123 1366 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 TRPM3Q9HCF6 1732 aaPredicted RBP16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 MYH11P35749 1972 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 FADS2P1A8MWK0 482 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 VILLO15195 856 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 RHOQP17081 205 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 GSTM2P28161 218 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 GPR65Q8IYL9 337 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 C12orf42Q96LP6 360 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 TMEM74Q96NL1 305 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 RIMS3Q9UJD0 308 aa16.97■□□□□ 0.31
HMGXB3-201ENST00000502717 FAM172BPA6NC97 362 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC30A4O14863 429 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 PAX3P23760 479 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 AQP1P29972 269 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 GNG2P59768 71 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 CPTPQ5TA50 214 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 GPR153Q6NV75 609 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 C11orf65Q8NCR3 313 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 HBEGFQ99075 208 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 OR2B2Q9GZK3 357 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 E9PAM4 449 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 AP1G1O43747 822 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 PSIP1O75475 530 aaKnown RBP16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 CHRNA1P02708 482 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 ZBTB48P10074 688 aaPredicted RBP16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 CPOXP36551 454 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC15A3Q8IY34 581 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 AKAP7Q9P0M2 348 aaPredicted RBP16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 MOXD2PA6NHM9 499 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 KPNA5O15131 536 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 STK16O75716 305 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 RPL9P32969 192 aaKnown RBP16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 CTNNB1P35222 781 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 NDUFV1P49821 464 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 GABARAPL2P60520 117 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 LGALS3BPQ08380 585 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 PPP1R3AQ16821 1122 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 PARP15Q460N3 678 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 NPLQ9BXD5 320 aaPredicted RBP16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 ABCG8Q9H221 673 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 NECTIN3Q9NQS3 549 aa16.96■□□□□ 0.31
HMGXB3-201ENST00000502717 PRORSD1PA6NEY8 169 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 TSPAN1O60635 241 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 CLDN9O95484 217 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 HDCP19113 662 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 PTGS2P35354 604 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 NUP62P37198 522 aaPredicted RBP16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 OR2T5Q6IEZ7 315 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 PLEKHG7Q6ZR37 379 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 SIAH1Q8IUQ4 282 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 OR2T29Q8NH02 315 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 UPF1Q92900 1129 aaKnown RBP eCLIP16.96■□□□□ 0.35e-8■■■■■ 44.4
HMGXB3-201ENST00000502717 FCRL3Q96P31 734 aaPredicted RBP16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 SORT1Q99523 831 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 SEZ6LQ9BYH1 1024 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 PRDM8Q9NQV8 689 aa16.96■□□□□ 0.3
HMGXB3-201ENST00000502717 AGRPO00253 132 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 RGS20O76081 388 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 ANXA8P13928 327 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 PPM1AP35813 382 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 BMXP51813 675 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 CREMQ03060 361 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 CYP2A13Q16696 494 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 NAPRTQ6XQN6 538 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 NAT16Q8N8M0 369 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 TRPV1Q8NER1 839 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 MAPK15Q8TD08 544 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 BRSK1Q8TDC3 778 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 SLC29A1Q99808 456 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 SPATA5L1Q9BVQ7 753 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 FUNDC2Q9BWH2 189 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 ANKRA2Q9H9E1 313 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 AGO1Q9UL18 857 aaKnown RBP16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 CLCA2Q9UQC9 943 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 RNF6Q9Y252 685 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 KERAO60938 352 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 TRBC1P01850 177 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 CD72P21854 359 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 CHRNA4P43681 627 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 PTPN5P54829 565 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 UFM1P61960 85 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 SULT1C3Q6IMI6 304 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 SLC2A7Q6PXP3 512 aa16.95■□□□□ 0.3
HMGXB3-201ENST00000502717 ABHD11Q8NFV4 315 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms