RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 DNPEPQ9ULA0 475 aa4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 WBP11Q9Y2W2 641 aaKnown RBP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P21-201ENST00000502313 COL11A2P13942 1736 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 ARFGEF1Q9Y6D6 1849 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 TRGV11A0A075B6L2 103 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 A0A0G2JLW4 131 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 PRAMEF33A0A0G2JMD5 474 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 TARSL2A2RTX5 802 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 C3orf70A6NLC5 250 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 YDJCA8MPS7 323 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 PSMD9O00233 223 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 E2F3O00716 465 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 DSCR3O14972 297 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 TO15178 435 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 NUDT21O43809 227 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 PRAMEF10O60809 474 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 SUN1O94901 812 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 SERPINB2P05120 415 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 SBK2P0C263 348 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 IRF1P10914 325 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 ACTN1P12814 892 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 DPEP1P16444 411 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 LBPP18428 481 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 CYP11B2P19099 503 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 CYP2A7P20853 494 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 HNRNPA2B1P22626 353 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 GSTM2P28161 218 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 TKTP29401 623 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 HIBADHP31937 336 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 CCR1P32246 355 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 MCM5P33992 734 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 PCGF2P35227 344 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 WNT5AP41221 380 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 ETV1P50549 477 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 SMSP52788 366 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 GPC5P78333 572 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 GALK2Q01415 458 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 SCGB2A2Q13296 93 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 MVPQ14764 893 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 UGP2Q16851 508 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 ATP13A5Q4VNC0 1218 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 C1orf185Q5T7R7 199 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 PODNL1Q6PEZ8 512 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 CLEC2AQ6UVW9 174 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 MACC1Q6ZN28 852 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 SEPT14Q6ZU15 432 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 GDF7Q7Z4P5 450 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 LDB1Q86U70 411 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 VASH2Q86V25 355 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 WDR5BQ86VZ2 330 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 ITPRIPQ8IWB1 547 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 TIGD4Q8IY51 512 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZNF679Q8IYX0 411 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 TTC5Q8N0Z6 440 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 BATF2Q8N1L9 274 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 DCLK2Q8N568 766 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 ENDOVQ8N8Q3 282 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 EIF1ADQ8N9N8 165 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 C8orf58Q8NAV2 365 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 SYT8Q8NBV8 401 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 CAGE1Q8TC20 777 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 GDPD5Q8WTR4 605 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 ATG4AQ8WYN0 398 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 WASF1Q92558 559 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 NSMAFQ92636 917 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 SPSB1Q96BD6 273 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 DTD2Q96FN9 168 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 NSMCE2Q96MF7 247 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 KLHL5Q96PQ7 755 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 FYTTD1Q96QD9 318 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 TPPP3Q9BW30 176 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 C1QTNF1Q9BXJ1 281 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 TPSD1Q9BZJ3 242 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLC7A5P2Q9GIP4 190 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 RAB17Q9H0T7 212 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 S1PR5Q9H228 398 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLCO5A1Q9H2Y9 848 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 CDCP1Q9H5V8 836 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 ANKZF1Q9H8Y5 726 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 PIH1D3Q9NQM4 214 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 RAI14Q9P0K7 980 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 DBF4Q9UBU7 674 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 BAIAP2L1Q9UHR4 511 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 HACL1Q9UJ83 578 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 RCOR1Q9UKL0 485 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 SNX7Q9UNH6 387 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 KCNK6Q9Y257 313 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 PLEKHA6Q9Y2H5 1048 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 AAR2Q9Y312 384 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 ABCC12Q96J65 1359 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 COL4A1P02462 1669 aa4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 TNRC6CQ9HCJ0 1690 aaKnown RBP4.26□□□□□ -1.73
HMGB1P21-201ENST00000502313 MAP3K15Q6ZN16 1313 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 C1orf226A1L170 272 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 NCF1BA6NI72 391 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 NCF1CA8MVU1 366 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 F8WDY8 70 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 TRIM77I1YAP6 450 aa4.25□□□□□ -1.73
HMGB1P21-201ENST00000502313 TLR4O00206 839 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms