RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 PPP1R14CQ8TAE6 165 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 CD200R1Q8TD46 325 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 INPP5DQ92835 1189 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 KIAA1191Q96A73 305 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 DTD2Q96FN9 168 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 SCYL1Q96KG9 808 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 ACOX2Q99424 681 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 COPS8Q99627 209 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 GPR21Q99679 349 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 TMPRSS13Q9BYE2 586 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 TRIM55Q9BYV6 548 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
CDC42-205ENST00000498236 DYRK4Q9NR20 520 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 SLC2A4RGQ9NR83 387 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 CPSF2Q9P2I0 782 aaKnown RBP7.55□□□□□ -1.2
CDC42-205ENST00000498236 TRMT6Q9UJA5 497 aaKnown RBP7.55□□□□□ -1.2
CDC42-205ENST00000498236 HAO1Q9UJM8 370 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 TMPRSS11EQ9UL52 423 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 TMCO1Q9UM00 188 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 FADS3Q9Y5Q0 445 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 PIAS3Q9Y6X2 628 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 PLXNA2O75051 1894 aa7.55□□□□□ -1.2
CDC42-205ENST00000498236 CKAP5Q14008 2032 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 BRWD1Q9NSI6 2320 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 TCF20Q9UGU0 1960 aaKnown RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 E5RI56 91 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 FAM229AH3BQW9 127 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 QSOX1O00391 747 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 TSPAN6O43657 245 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 ZBTB14O43829 449 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 KLK8O60259 260 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 NPHS1O60500 1241 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 SYNCRIPO60506 623 aaKnown RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 MAGEC1O60732 1142 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 KERAO60938 352 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 NIPSNAP2O75323 286 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 IPO13O94829 963 aaKnown RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 WISP1O95388 367 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 TPBGLP0DKB5 382 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 CBSLP0DN79 551 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 ALOX15P16050 662 aaPredicted RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 TFEBP19484 476 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 CHRM3P20309 590 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 DRD3P35462 400 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 CBSP35520 551 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 P2RY2P41231 377 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 GIPRP48546 466 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 SLC1A6P48664 564 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 METAP1P53582 386 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 ABCE1P61221 599 aaKnown RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 B4GALNT1Q00973 533 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 SATB1Q01826 763 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 SEMG2Q02383 582 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 ZBTB16Q05516 673 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 GALNT1Q10472 559 aaPredicted RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 GRSF1Q12849 480 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDC42-205ENST00000498236 ZNF284Q2VY69 593 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 LEXMQ3ZCV2 418 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 FBXO43Q4G163 708 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 C2orf27AQ580R0 203 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 LDLRAP1Q5SW96 308 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 GPRC6AQ5T6X5 926 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 ZNF776Q68DI1 518 aaPredicted RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 PTRHD1Q6GMV3 140 aaKnown RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 SDE2Q6IQ49 451 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 NAPRTQ6XQN6 538 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 CD163Q86VB7 1156 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 MMAAQ8IVH4 418 aaKnown RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 KIRREL3Q8IZU9 778 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 SPATA6LQ8N4H0 392 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 SIDT2Q8NBJ9 832 aaKnown RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 TXNDC5Q8NBS9 432 aaKnown RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 OR2T3Q8NH03 318 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 GIMAP7Q8NHV1 300 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 STAG3L4Q8TBR4 150 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 BTN2A2Q8WVV5 523 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 C10orf82Q8WW14 230 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 STON2Q8WXE9 905 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 SCAMP4Q969E2 229 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 PTERQ96BW5 349 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 L3HYPDHQ96EM0 354 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 PANX3Q96QZ0 392 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 ATOH8Q96SQ7 321 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 SORT1Q99523 831 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 TRMOQ9BU70 441 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 RIOK2Q9BVS4 552 aaKnown RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 BOCQ9BWV1 1114 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 GATA5Q9BWX5 397 aaPredicted RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 SPATA16Q9BXB7 569 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 C20orf27Q9GZN8 174 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 DRC3Q9H069 523 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 ABCG8Q9H221 673 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 STN1Q9H668 368 aaKnown RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 EPHX3Q9H6B9 360 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 ALG9Q9H6U8 611 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 CD248Q9HCU0 757 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 SPATS2LQ9NUQ6 558 aaKnown RBP7.54□□□□□ -1.2
CDC42-205ENST00000498236 SCML1Q9UN30 329 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 FAM50BQ9Y247 325 aa7.54□□□□□ -1.2
CDC42-205ENST00000498236 USH1CQ9Y6N9 552 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms