RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 P2RY10O00398 339 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 SYNCRIPO60506 623 aaKnown RBP3.09□□□□□ -1.91
PSPC1-205ENST00000497722 LDLRP01130 860 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 CGAP01215 116 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 IGHV4-39P01824 125 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 AKR1B1P15121 316 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 GM2AP17900 193 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 ZNF75DP51815 510 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 CDH11P55287 796 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 HILS1P60008 231 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 SPOCK1Q08629 439 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 MELKQ14680 651 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 RBBP5Q15291 538 aaKnown RBP3.09□□□□□ -1.91
PSPC1-205ENST00000497722 KIF26BQ2KJY2 2108 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 LETM2Q2VYF4 491 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 C6orf163Q5TEZ5 329 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 KRT79Q5XKE5 535 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 KRT39Q6A163 491 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 TMEM211Q6ICI0 200 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 BRINP3Q76B58 766 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 MARK2Q7KZI7 788 aaKnown RBP3.09□□□□□ -1.91
PSPC1-205ENST00000497722 NFE4Q86UQ8 179 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 GUF1Q8N442 669 aaKnown RBP3.09□□□□□ -1.91
PSPC1-205ENST00000497722 MINDY1Q8N5J2 469 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 DAZLQ92904 295 aaKnown RBP3.09□□□□□ -1.91
PSPC1-205ENST00000497722 TMEM143Q96AN5 459 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 NEK1Q96PY6 1258 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 ABHD1Q96SE0 405 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 GFI1Q99684 422 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 PSD2Q9BQI7 771 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 TRMT61BQ9BVS5 477 aaKnown RBP3.09□□□□□ -1.91
PSPC1-205ENST00000497722 MMP28Q9H239 520 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 TBC1D17Q9HA65 648 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 APOBEC3GQ9HC16 384 aaKnown RBP3.09□□□□□ -1.91
PSPC1-205ENST00000497722 ZNF334Q9HCZ1 680 aaPredicted RBP3.09□□□□□ -1.91
PSPC1-205ENST00000497722 KLHL1Q9NR64 748 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 ZFP57Q9NU63 452 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 TTLL3Q9Y4R7 772 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 FAM169AQ9Y6X4 670 aa3.09□□□□□ -1.91
PSPC1-205ENST00000497722 GPR75-ASB3A0A0A6YYF3 556 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 PRSS51A0A1B0GVH4 220 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 MAGEB17A8MXT2 336 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 FAM72CH0Y354 149 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 PAPSS1O43252 624 aaPredicted RBP3.08□□□□□ -1.92
PSPC1-205ENST00000497722 XRCC3O43542 346 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 CIDEAO60543 219 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 CTSVO60911 334 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 SLC22A3O75751 556 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 BAG4O95429 457 aaKnown RBP3.08□□□□□ -1.92
PSPC1-205ENST00000497722 TRIM21P19474 475 aaKnown RBP3.08□□□□□ -1.92
PSPC1-205ENST00000497722 ANOS1P23352 680 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 RAD52P43351 418 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 SLC9A3P48764 834 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 MMP15P51511 669 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 HSD17B4P51659 736 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 PDX1P52945 283 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 RPL24P83731 157 aaKnown RBP3.08□□□□□ -1.92
PSPC1-205ENST00000497722 CXCL9Q07325 125 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 PRKAA1Q13131 559 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 GRAPQ13588 217 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 PCLAFQ15004 111 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 FAM72AQ5TYM5 149 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 SFMBT2Q5VUG0 894 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 FAM72DQ6L9T8 149 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 NAA16Q6N069 864 aaPredicted RBP3.08□□□□□ -1.92
PSPC1-205ENST00000497722 SLC27A1Q6PCB7 646 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 TMED8Q6PL24 325 aaPredicted RBP3.08□□□□□ -1.92
PSPC1-205ENST00000497722 PLXDC2Q6UX71 529 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 Q75L30 129 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 FAM72BQ86X60 149 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 GPALPP1Q8IXQ4 340 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 CDK20Q8IZL9 346 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 SCML4Q8N228 414 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 POGLUT1Q8NBL1 392 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 RBM15BQ8NDT2 890 aaKnown RBP3.08□□□□□ -1.92
PSPC1-205ENST00000497722 TSPAN14Q8NG11 270 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 EXD1Q8NHP7 514 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 GRAPLQ8TC17 118 aaPredicted RBP3.08□□□□□ -1.92
PSPC1-205ENST00000497722 ZNF473Q8WTR7 871 aaKnown RBP3.08□□□□□ -1.92
PSPC1-205ENST00000497722 TM9SF4Q92544 642 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 ZNF622Q969S3 477 aaKnown RBP eCLIP3.08□□□□□ -1.92
PSPC1-205ENST00000497722 NXNL1Q96CM4 212 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 TMCO6Q96DC7 493 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 SCRN2Q96FV2 425 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 MS4A10Q96PG2 267 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 OR6C1Q96RD1 312 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 SEPHS2Q99611 448 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 NPAP1Q9NZP6 1156 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 MORF4L1Q9UBU8 362 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 DDX25Q9UHL0 483 aaKnown RBP3.08□□□□□ -1.92
PSPC1-205ENST00000497722 SLC24A2Q9UI40 661 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 SLC7A7Q9UM01 511 aa3.08□□□□□ -1.92
PSPC1-205ENST00000497722 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 A0A1W2PPI3 338 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 A0A1W2PR77 199 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 A0A1W2PRB8 838 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 HYKKA2RU49 373 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 DUXAA6NLW8 204 aa3.07□□□□□ -1.92
PSPC1-205ENST00000497722 OR6C76A6NM76 312 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms