RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 NOS1APO75052 506 aaPredicted RBP12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 MAFO75444 373 aaPredicted RBP12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 TNFRSF21O75509 655 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 IQCF3P0C7M6 154 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 MSH3P20585 1137 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 LMO2P25791 158 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 WEE1P30291 646 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 RCAN2Q14206 197 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 SLC25A52Q3SY17 297 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 SYT6Q5T7P8 510 aaPredicted RBP12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 ISCA2Q86U28 154 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 LSMEM1Q8N8F7 131 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 ATG16L2Q8NAA4 619 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 SETD9Q8NE22 299 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 SEPT1Q8WYJ6 367 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 TSPAN17Q96FV3 270 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 PCYT2Q99447 389 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 VAT1Q99536 393 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 ZSCAN5AQ9BUG6 496 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 ITPAQ9BY32 194 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 UCK2Q9BZX2 261 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 ACAD9Q9H845 621 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 DDIT4Q9NX09 232 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 UBA2Q9UBT2 640 aaPredicted RBP12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 RAPGEFL1Q9UHV5 662 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 COMMD10Q9Y6G5 202 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 SHROOM3Q8TF72 1996 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 MEIOCA2RUB1 952 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 A8MUA0 341 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 ENPP3O14638 875 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 SLC35A2P78381 396 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 EMX2Q04743 252 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 CXCL9Q07325 125 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 PRKG2Q13237 762 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 TWF2Q6IBS0 349 aaKnown RBP12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 CYP4Z1Q86W10 505 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 AMIGO1Q86WK6 493 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 C2CD4AQ8NCU7 369 aaPredicted RBP12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 CENPIQ92674 756 aaPredicted RBP12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 SLC38A4Q969I6 547 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 MYOZ2Q9NPC6 264 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 TMLHEQ9NVH6 421 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 KIAA1257Q9ULG3 409 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 NME7Q9Y5B8 376 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 HPRP00739 348 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 UBA1P22314 1058 aaKnown RBP12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 ZNF45Q02386 682 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 STARD3Q14849 445 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 ARHGEF6Q15052 776 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 PAFAH1B3Q15102 231 aaKnown RBP12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 EDEM1Q92611 657 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 TSEN34Q9BSV6 310 aaKnown RBP12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 CDADC1Q9BWV3 514 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 RERGLQ9H628 205 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 SLA2Q9H6Q3 261 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 TMEM39AQ9NV64 488 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 KCNN3Q9UGI6 736 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 PKP3Q9Y446 797 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 UBA6A0AVT1 1052 aaPredicted RBP12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 AKR7A2O43488 359 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 MATN4O95460 622 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 IL7P13232 177 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 KRT20P35900 424 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 FAM160B1Q5W0V3 765 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 PAMR1Q6UXH9 720 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 DPY19L3Q6ZPD9 716 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 LINC00299Q6ZSB3 139 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 PHYKPLQ8IUZ5 450 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 LRRC20Q8TCA0 184 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 C12orf42Q96LP6 360 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 KLRG2A4D1S0 409 aaPredicted RBP12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 SMLR1H3BR10 107 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 EEDO75530 441 aaKnown RBP12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 CCNYL3P0C7X3 344 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 DNAJB1P25685 340 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 GRIK1P39086 918 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 CSRP3P50461 194 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 INCA1Q0VD86 236 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 MED10Q9BTT4 135 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 TRHDEQ9UKU6 1024 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 KCNH4Q9UQ05 1017 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 FAM50BQ9Y247 325 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 ARID2Q68CP9 1835 aa12.86□□□□□ -0.35
GAPVD1-220ENST00000497580 TANC1Q9C0D5 1861 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 DSCR3O14972 297 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 CA5AP35218 305 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 ZMAT1Q5H9K5 638 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 EFCAB12Q6NXP0 572 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 Q6ZPB1 254 aaPredicted RBP12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 NECAB2Q7Z6G3 386 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 GALNT10Q86SR1 603 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 TTC29Q8NA56 475 aaPredicted RBP12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 OR5K1Q8NHB7 308 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 PCNPQ8WW12 178 aaKnown RBP12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 COPS4Q9BT78 406 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 TSPAN4O14817 238 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 SERPINA1P01009 418 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 PSKH1P11801 424 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 GGT1P19440 569 aa12.85□□□□□ -0.35
GAPVD1-220ENST00000497580 GRK5P34947 590 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms