RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 PUM1Q14671 1186 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS26A-209ENST00000497564 OR4D1Q15615 310 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 ACSBG2Q5FVE4 666 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 ATG16L1Q676U5 607 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 KIAA0895LQ68EN5 471 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 ADAMTSL2Q86TH1 951 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 TRIM74Q86UV6 250 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 SYT12Q8IV01 421 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 C10orf107Q8IVU9 208 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 SPNS2Q8IVW8 549 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 MYO1HQ8N1T3 1032 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 STAG3L4Q8TBR4 150 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 NETO1Q8TDF5 533 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 ASZ1Q8WWH4 475 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 SREK1Q8WXA9 508 aaKnown RBP13.92□□□□□ -0.18
VPS26A-209ENST00000497564 ELMO1Q92556 727 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 FOXJ1Q92949 421 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 GLMNQ92990 594 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 CHMP6Q96FZ7 201 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 APOOQ9BUR5 198 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 ALG9Q9H6U8 611 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 RMI1Q9H9A7 625 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 CPSF2Q9P2I0 782 aaKnown RBP13.92□□□□□ -0.18
VPS26A-209ENST00000497564 TMCO1Q9UM00 188 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 DMTF1Q9Y222 760 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 CDYLQ9Y232 598 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 HS3ST3A1Q9Y663 406 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 SLCO1B1Q9Y6L6 691 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 CACNA1EQ15878 2313 aa13.92□□□□□ -0.18
VPS26A-209ENST00000497564 PCM1Q15154 2024 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 SLC5A10A0PJK1 596 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 KLHL33A6NCF5 533 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 SYCE1LA8MT33 242 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 TCP11X1B4DZS4 312 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 FPGTO14772 594 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 SLC30A4O14863 429 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 SLC31A1O15431 190 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 DLX3O60479 287 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 TRIM13O60858 407 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 NDUFS2O75306 463 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 IGHV4-34P06331 123 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 BGNP21810 368 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 GRK2P25098 689 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 PLOD1Q02809 727 aaPredicted RBP13.91□□□□□ -0.18
VPS26A-209ENST00000497564 ASPHQ12797 758 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 CHI3L2Q15782 390 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 TRIM61Q5EBN2 209 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 STPG1Q5TH74 334 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 PEAR1Q5VY43 1037 aaPredicted RBP13.91□□□□□ -0.18
VPS26A-209ENST00000497564 LIPMQ5VYY2 423 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 CYHR1Q6ZMK1 362 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 C11orf96Q7Z7L8 435 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 RASGRP3Q8IV61 690 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 SLC22A9Q8IVM8 553 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 ZNF547Q8IVP9 402 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 OXR1Q8N573 874 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 BEND7Q8N7W2 519 aaPredicted RBP13.91□□□□□ -0.18
VPS26A-209ENST00000497564 TMEM145Q8NBT3 493 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 EDEM2Q9BV94 578 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 LGR4Q9BXB1 951 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 UNKQ9C0B0 810 aaKnown RBP13.91□□□□□ -0.18
VPS26A-209ENST00000497564 C6orf106Q9H6K1 298 aaPredicted RBP13.91□□□□□ -0.18
VPS26A-209ENST00000497564 IKZF3Q9UKT9 509 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 SLC17A4Q9Y2C5 497 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 ADAMTS9Q9P2N4 1935 aa13.91□□□□□ -0.18
VPS26A-209ENST00000497564 ASCC3Q8N3C0 2202 aaKnown RBP13.91□□□□□ -0.18
VPS26A-209ENST00000497564 NPEPPSL1A6NEC2 478 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 A8MT66 165 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 CACNB4O00305 520 aaPredicted RBP13.9□□□□□ -0.18
VPS26A-209ENST00000497564 CDC7O00311 574 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 BTN3A1O00481 513 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 LIN7AO14910 233 aaPredicted RBP13.9□□□□□ -0.18
VPS26A-209ENST00000497564 KHNYNO15037 678 aaKnown RBP13.9□□□□□ -0.18
VPS26A-209ENST00000497564 KLK8O60259 260 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 SMIM24O75264 130 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 SNNO75324 88 aaPredicted RBP13.9□□□□□ -0.18
VPS26A-209ENST00000497564 SERPINE1P05121 402 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 NEFHP12036 1026 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 MTHFD2P13995 350 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 AKT2P31751 481 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 MAPK9P45984 424 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 KCNC1P48547 511 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 SEC24CP53992 1094 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 PFN3P60673 137 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 YPEL5P62699 121 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 TERF2Q15554 542 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 TSNQ15631 228 aaKnown RBP13.9□□□□□ -0.18
VPS26A-209ENST00000497564 SBSNQ6UWP8 590 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 DGLUCYQ7Z3D6 616 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 PIWIL4Q7Z3Z4 852 aaKnown RBP13.9□□□□□ -0.18
VPS26A-209ENST00000497564 LRRTM4Q86VH4 590 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 TRAPPC5Q8IUR0 188 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 LRRC34Q8IZ02 419 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 OR2L2Q8NH16 312 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 FAM174AQ8TBP5 190 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 HM13Q8TCT9 377 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 SCARF2Q96GP6 870 aaPredicted RBP13.9□□□□□ -0.18
VPS26A-209ENST00000497564 FZD3Q9NPG1 666 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 GULP1Q9UBP9 304 aa13.9□□□□□ -0.18
VPS26A-209ENST00000497564 RNF112Q9ULX5 631 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms