RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ESYT2A0FGR8 921 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ILVBLA1L0T0 632 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MEIS2O14770 477 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 VILLO15195 856 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC16A6O15403 523 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SEC14L5O43304 696 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 GMDSO60547 372 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 LPXNO60711 386 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CCDC22O60826 627 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 OR7A10O76100 309 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TJP3O95049 919 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MFN2O95140 757 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DEXIO95424 95 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TGM6O95932 706 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CRYABP02511 175 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 APOA1P02647 267 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 GNAI2P04899 355 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 THP07101 528 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 GNAI3P08754 354 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PLA2G4BP0C869 781 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 AOAHP28039 575 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SERPINF1P36955 418 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PGDP52209 483 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SELENOVP59797 346 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 FSTL1Q12841 308 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ILF2Q12905 390 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 NOGQ13253 232 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SMCO1Q147U7 214 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 POU6F1Q14863 301 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PON3Q15166 354 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 LRRC36Q1X8D7 754 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 HFEQ30201 348 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CCDC157Q569K6 752 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF311Q5JNZ3 666 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 FAXCQ5TGI0 409 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PRAMEF9Q5VWM5 478 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLX4IPQ5VYV7 408 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 KCTD11Q693B1 232 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 KIAA0408Q6ZU52 694 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ERN2Q76MJ5 926 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 NIPA1Q7RTP0 329 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PAGE2Q7Z2X7 111 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TRIM69Q86WT6 500 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 KIAA2013Q8IYS2 634 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF679Q8IYX0 411 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MCOLN2Q8IZK6 566 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 BCL6BQ8N143 479 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PDIK1LQ8N165 341 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RASGEF1CQ8N431 466 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TRAM1L1Q8N609 369 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ASCC1Q8N9N2 400 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 EIF1ADQ8N9N8 165 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 OR4D10Q8NGI6 311 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RNASE11Q8TAA1 199 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 FIBINQ8TAL6 211 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PNPT1Q8TCS8 783 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CD300LFQ8TDQ1 290 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PSPC1Q8WXF1 523 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DPF1Q92782 380 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 NT5C3BQ969T7 300 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RNF125Q96EQ8 232 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TMEM176AQ96HP8 235 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SERAC1Q96JX3 654 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 LURAP1Q96LR2 239 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF285Q96NJ3 590 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 WWC2-AS2Q96NR7 200 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 UBAC1Q9BSL1 405 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 C1QTNF3Q9BXJ4 246 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC6A15Q9H2J7 730 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 C14orf93Q9H972 538 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ARMT1Q9H993 441 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MCCC2Q9HCC0 563 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ZDHHC4Q9NPG8 344 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DLL4Q9NR61 685 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CCM2LQ9NUG4 571 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 ARL8BQ9NVJ2 186 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 TRNAU1APQ9NX07 287 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 DDX43Q9NXZ2 648 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 USP36Q9P275 1121 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 UVRAGQ9P2Y5 699 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 PI4KBQ9UBF8 816 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CTSFQ9UBX1 484 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC24A2Q9UI40 661 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 STAP1Q9ULZ2 295 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 USP15Q9Y4E8 981 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 RTEL1-TNFRSF6BF6WH68 1400 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CTTNBP2Q8WZ74 1663 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CLUHO75153 1309 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MN1Q10571 1320 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 A0A0B4J293 547 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 LRRC53A6NM62 1247 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 AGAP14A8MT82 685 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 A8MXQ7 604 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 KPNA7A9QM74 516 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SOCS6O14544 535 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 SCAMP2O15127 329 aaKnown RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 CD3GP09693 182 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 UBTFL1P0CB47 393 aaPredicted RBP3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 MYF5P13349 255 aa3.06□□□□□ -1.92
SNRNP48-202ENST00000496946 NQO1P15559 274 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms