RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 COQ3Q9NZJ6 369 aa5.15□□□□□ -1.59
SF3B1-212ENST00000496458 SPIN1Q9Y657 262 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-212ENST00000496458 STK36Q9NRP7 1315 aa5.15□□□□□ -1.59
SF3B1-212ENST00000496458 KIAA1210Q9ULL0 1709 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 NCAPD3P42695 1498 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 SMARCA2P51531 1590 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 PRSS51A0A1B0GVH4 220 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 VILLO15195 856 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 IGLV1-44P01699 117 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 CAPN3P20807 821 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 SUOXP51687 545 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 MFAP4P55083 255 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 FAM98BQ52LJ0 330 aaKnown RBP5.14□□□□□ -1.59
SF3B1-212ENST00000496458 SNRNP27Q8WVK2 155 aaKnown RBP5.14□□□□□ -1.59
SF3B1-212ENST00000496458 SKA1Q96BD8 255 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 FAM81BQ96LP2 452 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 ABHD6Q9BV23 337 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 HHATLQ9HCP6 504 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 CHMP1AQ9HD42 196 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-212ENST00000496458 NPAP1Q9NZP6 1156 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 SLC7A7Q9UM01 511 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 RABGAP1Q9Y3P9 1069 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 SNED1Q8TER0 1413 aa5.14□□□□□ -1.59
SF3B1-212ENST00000496458 LRRC72A6NJI9 287 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 NR5A2O00482 541 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 PSMD14O00487 310 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 ZBED4O75132 1171 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 ITGA3P26006 1051 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 AIMP2Q13155 320 aaKnown RBP5.13□□□□□ -1.59
SF3B1-212ENST00000496458 FFAR4Q5NUL3 377 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 LCE1FQ5T754 118 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 FAM43BQ6ZT52 329 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-212ENST00000496458 INTS8Q75QN2 995 aaKnown RBP5.13□□□□□ -1.59
SF3B1-212ENST00000496458 KRTAP7-1Q8IUC3 87 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 DNAJC22Q8N4W6 341 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 CCDC89Q8N998 374 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 TMEM143Q96AN5 459 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 SAT2Q96F10 170 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-212ENST00000496458 ASCL2Q99929 193 aa5.13□□□□□ -1.59
SF3B1-212ENST00000496458 BAZ1BQ9UIG0 1483 aaKnown RBP5.13□□□□□ -1.59
SF3B1-212ENST00000496458 WIZO95785 1651 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 IGKV3D-15A0A087WSY6 115 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 MED19A0JLT2 244 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-212ENST00000496458 ELOVL7A1L3X0 281 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 TCERG1O14776 1098 aaKnown RBP5.12□□□□□ -1.59
SF3B1-212ENST00000496458 TO15178 435 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 CLPTM1O96005 669 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 PLA2G4BP0C869 781 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 PSMB10P40306 273 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 TMF1P82094 1093 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 MELKQ14680 651 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 GTDC1Q4AE62 458 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 CORO6Q6QEF8 472 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 AACSQ86V21 672 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 HCAR2Q8TDS4 363 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 LRRC59Q96AG4 307 aaKnown RBP5.12□□□□□ -1.59
SF3B1-212ENST00000496458 MTERF3Q96E29 417 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 TRAF4Q9BUZ4 470 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-212ENST00000496458 SYNCQ9H7C4 482 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 C2orf42Q9NWW7 574 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 MRPS28Q9Y2Q9 187 aaKnown RBP5.12□□□□□ -1.59
SF3B1-212ENST00000496458 ITIH6Q6UXX5 1313 aa5.12□□□□□ -1.59
SF3B1-212ENST00000496458 RSF1Q96T23 1441 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-212ENST00000496458 SMCHD1A6NHR9 2005 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 A0A1B0GU03 582 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 ANTXRLA6NF34 631 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 B4DLN1 442 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 DOK2O60496 412 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 NGFP01138 241 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 CEACAM1P13688 526 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 SLC15A1P46059 708 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 RXRGP48443 463 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 MRPL12P52815 198 aaKnown RBP5.11□□□□□ -1.59
SF3B1-212ENST00000496458 GEMIN4P57678 1058 aaKnown RBP5.11□□□□□ -1.59
SF3B1-212ENST00000496458 ITGA9Q13797 1035 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 ZFP69Q49AA0 526 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 HYIQ5T013 277 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 ZC2HC1BQ5TFG8 222 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 ARHGEF16Q5VV41 709 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 ZNF497Q6ZNH5 498 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 ZNF485Q8NCK3 441 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 DDHD1Q8NEL9 900 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 ERLEC1Q96DZ1 483 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 CCDC34Q96HJ3 373 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 ART5Q96L15 291 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 TIGD1Q96MW7 591 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 MYADMQ96S97 322 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 MAK16Q9BXY0 300 aaKnown RBP5.11□□□□□ -1.59
SF3B1-212ENST00000496458 RTN4RQ9BZR6 473 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 EGLN1Q9GZT9 426 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 RHCGQ9UBD6 479 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 PEG3Q9GZU2 1588 aa5.11□□□□□ -1.59
SF3B1-212ENST00000496458 LNP1A1A4G5 178 aa5.1□□□□□ -1.59
SF3B1-212ENST00000496458 DNM1LO00429 736 aa5.1□□□□□ -1.59
SF3B1-212ENST00000496458 TBX6O95947 436 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-212ENST00000496458 ZNF26P17031 533 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-212ENST00000496458 CEACAM8P31997 349 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-212ENST00000496458 KCNJ10P78508 379 aa5.1□□□□□ -1.59
SF3B1-212ENST00000496458 MC1RQ01726 317 aa5.1□□□□□ -1.59
SF3B1-212ENST00000496458 HMGXB3Q12766 1538 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms