RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 APLP1P51693 650 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 SRP54P61011 504 aaKnown RBP12.96□□□□□ -0.33
PTPRF-215ENST00000496447 PRR5P85299 388 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 DENND5AQ6IQ26 1287 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 SAPCD2Q86UD0 394 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 AHI1Q8N157 1196 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 AZIN2Q96A70 460 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 G3V2T6 193 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 INPPL1O15357 1258 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 CCNKO75909 580 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 CHRNGP07510 517 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 PFKMP08237 780 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 CLEC6AQ6EIG7 209 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 TMEM110Q86TL2 294 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 KBTBD8Q8NFY9 601 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 CCSER2Q9H7U1 834 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 TXNRD2Q9NNW7 524 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 NOCTQ9UK39 431 aaKnown RBP12.96□□□□□ -0.33
PTPRF-215ENST00000496447 B4DGG1 531 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 SLC7A4O43246 635 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 COL6A1P12109 1028 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 RAB25P57735 213 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 TAS2R50P59544 299 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 ANKRD22Q5VYY1 191 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 SNX20Q7Z614 316 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 PQLC1Q8N2U9 271 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 CYB5D2Q8WUJ1 264 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 EBPLQ9BY08 206 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 TBCCD1Q9NVR7 557 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 ARL5AQ9Y689 179 aa12.96□□□□□ -0.33
PTPRF-215ENST00000496447 RGS20O76081 388 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 NR2F6P10588 404 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 ACP5P13686 325 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 CPN2P22792 545 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 TCEA1P23193 301 aaKnown RBP12.96□□□□□ -0.34
PTPRF-215ENST00000496447 PTGS2P35354 604 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 PCDH19Q8TAB3 1148 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 PRR5-ARHGAP8B1AHC4 643 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 PI15O43692 258 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 S100GP29377 79 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 ARHGAP8P85298 464 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 HEPACAMQ14CZ8 416 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 QPRTQ15274 297 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 TMEM139Q8IV31 216 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 INTS10Q9NVR2 710 aaKnown RBP12.96□□□□□ -0.34
PTPRF-215ENST00000496447 DMAC2Q9NW81 257 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 EIF2B4Q9UI10 523 aaKnown RBP12.96□□□□□ -0.34
PTPRF-215ENST00000496447 IKZF2Q9UKS7 526 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 ING4Q9UNL4 249 aa12.96□□□□□ -0.34
PTPRF-215ENST00000496447 PRKCGP05129 697 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 CHRNB2P17787 502 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 RYKP34925 604 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 PLA2G16P53816 162 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 SUZ12Q15022 739 aaKnown RBP12.95□□□□□ -0.34
PTPRF-215ENST00000496447 EOGTQ5NDL2 527 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 NCCRP1Q6ZVX7 275 aaPredicted RBP12.95□□□□□ -0.34
PTPRF-215ENST00000496447 ATCAYQ86WG3 371 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 GTPBP2Q9BX10 602 aaKnown RBP12.95□□□□□ -0.34
PTPRF-215ENST00000496447 HMGXB4Q9UGU5 601 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 U3KQV3 271 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 PGDP52209 483 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 FSTL1Q12841 308 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 CA9Q16790 459 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 TMEM164Q5U3C3 297 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 RALGPS2Q86X27 583 aaPredicted RBP12.95□□□□□ -0.34
PTPRF-215ENST00000496447 DENND2DQ9H6A0 471 aaPredicted RBP12.95□□□□□ -0.34
PTPRF-215ENST00000496447 PREBQ9HCU5 417 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 CNTN3Q9P232 1028 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 IQCMA0A1B0GVH7 501 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 IRGMA1A4Y4 181 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 OR4F21O95013 312 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 SYPL2Q5VXT5 272 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 MFSD5Q6N075 450 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 DPYSL5Q9BPU6 564 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 GPATCH1Q9BRR8 931 aaKnown RBP12.95□□□□□ -0.34
PTPRF-215ENST00000496447 DTLQ9NZJ0 730 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 WRAP73Q9P2S5 460 aaPredicted RBP12.95□□□□□ -0.34
PTPRF-215ENST00000496447 GNAZP19086 355 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 ALDH4A1P30038 563 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 GHRHRQ02643 423 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 FSTL4Q6MZW2 842 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 LIX1Q8N485 282 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 BPIFB1Q8TDL5 484 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 AGAP2Q99490 1192 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 C8orf4Q9NR00 106 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 CALML5Q9NZT1 146 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 IGSF9Q9P2J2 1179 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 PCDHGA11Q9Y5H2 935 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 COL14A1Q05707 1796 aaKnown RBP12.95□□□□□ -0.34
PTPRF-215ENST00000496447 SAGE2PA6NJ88 616 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 PRLP01236 227 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 CTSKP43235 329 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 GLYATQ6IB77 296 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 EIF2B3Q9NR50 452 aaKnown RBP12.95□□□□□ -0.34
PTPRF-215ENST00000496447 ING3Q9NXR8 418 aa12.95□□□□□ -0.34
PTPRF-215ENST00000496447 ILVBLA1L0T0 632 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 TMEM150CB9EJG8 249 aa12.94□□□□□ -0.34
PTPRF-215ENST00000496447 FGF18O76093 207 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms