RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 LCP2Q13094 533 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 PCBP2Q15366 365 aaKnown RBP eCLIP10.08□□□□□ -0.8
HDAC3-214ENST00000495485 TGFBIQ15582 683 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 UNC50Q53HI1 259 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 C6orf163Q5TEZ5 329 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 ZNF776Q68DI1 518 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-214ENST00000495485 HSD11B1LQ7Z5J1 315 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 ALYREFQ86V81 257 aaKnown RBP10.08□□□□□ -0.8
HDAC3-214ENST00000495485 C10orf67Q8IYJ2 551 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 MAML2Q8IZL2 1156 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-214ENST00000495485 LSMEM2Q8N112 164 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 MCOLN3Q8TDD5 553 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 ACTRT2Q8TDY3 377 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 GLYATL1Q969I3 302 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 ATP6V1E2Q96A05 226 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 NUS1Q96E22 293 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 DTD2Q96FN9 168 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 COQ10AQ96MF6 247 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 FAM129BQ96TA1 746 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 EBF4Q9BQW3 602 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 BTBD10Q9BSF8 475 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 RIOK2Q9BVS4 552 aaKnown RBP10.08□□□□□ -0.8
HDAC3-214ENST00000495485 BOCQ9BWV1 1114 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 NMUR2Q9GZQ4 415 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 RSPH9Q9H1X1 276 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-214ENST00000495485 ABCG8Q9H221 673 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 C1orf21Q9H246 121 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 GSTO2Q9H4Y5 243 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 CD248Q9HCU0 757 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 MID1IP1Q9NPA3 183 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 PRSS16Q9NQE7 514 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 NDE1Q9NXR1 346 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 CACNA2D2Q9NY47 1150 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 CD84Q9UIB8 345 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 PLXNA2O75051 1894 aa10.08□□□□□ -0.8
HDAC3-214ENST00000495485 PLXNB3Q9ULL4 1909 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 TCRBV21S2A2A0A5A6 115 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 KLHL33A6NCF5 533 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 IQCF5A8MTL0 148 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 ZNF195O14628 629 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 AZIN1O14977 448 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 AREL1O15033 823 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 FFAR2O15552 330 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 VEGFDO43915 354 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 NUAK1O60285 661 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 KATNA1O75449 491 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 TSPAN12O95859 305 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 DNTTP04053 509 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 UROSP10746 265 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 MTHFD2P13995 350 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 MAP4P27816 1152 aaKnown RBP10.07□□□□□ -0.8
HDAC3-214ENST00000495485 AOAHP28039 575 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 ETV3P41162 512 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 NBL1P41271 181 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 GPR1P46091 355 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 PSMD8P48556 350 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 HNMTP50135 292 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 AP1S2P56377 157 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 STX1BP61266 288 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 CREB5Q02930 508 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 RALGDSQ12967 914 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 RBBP7Q16576 425 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 SYTL3Q4VX76 610 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 TMEM92Q6UXU6 159 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 ASRGL1Q7L266 308 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 MMAAQ8IVH4 418 aaKnown RBP10.07□□□□□ -0.8
HDAC3-214ENST00000495485 CLDN19Q8N6F1 224 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 ZNF366Q8N895 744 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 PNPLA1Q8N8W4 532 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 PDPRQ8NCN5 879 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 AGR3Q8TD06 166 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 SKA2Q8WVK7 121 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-214ENST00000495485 GAB3Q8WWW8 586 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 ATL1Q8WXF7 558 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 VOPP1Q96AW1 172 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 ARRDC3Q96B67 414 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 TMEM159Q96B96 161 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 SIPA1Q96FS4 1042 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 LOXL4Q96JB6 756 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 CCM2Q9BSQ5 444 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 HGH1Q9BTY7 390 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 CCDC106Q9BWC9 280 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 C1QTNF7Q9BXJ2 289 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 NUF2Q9BZD4 464 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 MEAF6Q9HAF1 191 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 RIC8BQ9NVN3 520 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 HCN2Q9UL51 889 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 FZD4Q9ULV1 537 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 NCKAP1Q9Y2A7 1128 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 CABIN1Q9Y6J0 2220 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 NUMA1Q14980 2115 aa10.07□□□□□ -0.8
HDAC3-214ENST00000495485 NCF1BA6NI72 391 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 NCF1CA8MVU1 366 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 CAPN14A8MX76 684 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 PROB1E7EW31 1015 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 LIN7AO14910 233 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 GRID2O43424 1007 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 FOXD2O60548 495 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 TM7SF2O76062 418 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 RECQL5O94762 991 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms