RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 DAAM2Q86T65 1068 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 TC2NQ8N9U0 490 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 RNF214Q8ND24 703 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 ACTL9Q8TC94 416 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 FANCEQ9HB96 536 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 LUC7LQ9NQ29 371 aaKnown RBP22.62■■□□□ 1.21
COL27A1-208ENST00000494780 POMT2Q9UKY4 750 aa22.62■■□□□ 1.21
COL27A1-208ENST00000494780 C17orf113A0A1B0GUU1 675 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 CFAP99D6REC4 459 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 STK10O94804 968 aaKnown RBP22.61■■□□□ 1.21
COL27A1-208ENST00000494780 PDGFAP04085 211 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 POLR2CP19387 275 aaPredicted RBP22.61■■□□□ 1.21
COL27A1-208ENST00000494780 PSMB4P28070 264 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 HADHAP40939 763 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 ARCN1P48444 511 aaKnown RBP22.61■■□□□ 1.21
COL27A1-208ENST00000494780 MLLT10P55197 1068 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 GSDMDP57764 484 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 OTUD4Q01804 1114 aaKnown RBP22.61■■□□□ 1.21
COL27A1-208ENST00000494780 GPS2Q13227 327 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 MSLNQ13421 630 aaPredicted RBP22.61■■□□□ 1.21
COL27A1-208ENST00000494780 SPA17Q15506 151 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 SNX20Q7Z614 316 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 CCDC170Q8IYT3 715 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 NXPE1Q8N323 547 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 LILRA3Q8N6C8 439 aaPredicted RBP22.61■■□□□ 1.21
COL27A1-208ENST00000494780 ACVR1CQ8NER5 493 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 OR4E2Q8NGC2 313 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 OR13C4Q8NGS5 318 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 PPM1MQ96MI6 270 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 PPP1R2P1Q96PQ5 205 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 COPS8Q99627 209 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 C1GALT1Q9NS00 363 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 TFR2Q9UP52 801 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 PCDHGA9Q9Y5G4 932 aaKnown RBP22.61■■□□□ 1.21
COL27A1-208ENST00000494780 PCDHA3Q9Y5H8 950 aa22.61■■□□□ 1.21
COL27A1-208ENST00000494780 ITGALP20701 1170 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 CDH3P22223 829 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 CTNNA1P35221 906 aaKnown RBP22.6■■□□□ 1.21
COL27A1-208ENST00000494780 PTPN7P35236 360 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 ZNF140P52738 457 aaPredicted RBP22.6■■□□□ 1.21
COL27A1-208ENST00000494780 EIF3EP60228 445 aaKnown RBP22.6■■□□□ 1.21
COL27A1-208ENST00000494780 OLIG2Q13516 323 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 IL10RAQ13651 578 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 FBXO38Q6PIJ6 1188 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 SLC38A9Q8NBW4 561 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 CPT1BQ92523 772 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 CALR3Q96L12 384 aaKnown RBP22.6■■□□□ 1.21
COL27A1-208ENST00000494780 SPATA13Q96N96 652 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 CHST8Q9H2A9 424 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 SYTL2Q9HCH5 934 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 ACSS2Q9NR19 701 aa22.6■■□□□ 1.21
COL27A1-208ENST00000494780 FEZ2Q9UHY8 353 aaPredicted RBP22.6■■□□□ 1.21
COL27A1-208ENST00000494780 MACROD2A1Z1Q3 448 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 SLC9B1P1A6NJY1 282 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 KCNN4O15554 427 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 PJA2O43164 708 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 RAB40ALP0C0E4 278 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 RBP3P10745 1247 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 GP1BBP13224 206 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 ATP1B2P14415 290 aaPredicted RBP22.59■■□□□ 1.21
COL27A1-208ENST00000494780 CTNNA2P26232 953 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 PLEKHS1Q5SXH7 462 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 CPZQ66K79 652 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 LCN9Q8WX39 176 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 SLC25A23Q9BV35 468 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 TLR10Q9BXR5 811 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 OSBPL8Q9BZF1 889 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 SRMSQ9H3Y6 488 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 ARNT2Q9HBZ2 717 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 MLXIPLQ9NP71 852 aa22.59■■□□□ 1.21
COL27A1-208ENST00000494780 MEN1O00255 615 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 MSL3P1P0C860 447 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 CYLC1P35663 651 aaPredicted RBP22.58■■□□□ 1.21
COL27A1-208ENST00000494780 PGDP52209 483 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 TMPRSS15P98073 1019 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 GPR33Q49SQ1 333 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 DENND5AQ6IQ26 1287 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 DARS2Q6PI48 645 aaKnown RBP22.58■■□□□ 1.21
COL27A1-208ENST00000494780 DSELQ8IZU8 1212 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 LRRC45Q96CN5 670 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 FERD3LQ96RJ6 166 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 TBL1YQ9BQ87 522 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 ING2Q9H160 280 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 FAM96AQ9H5X1 160 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 COG4Q9H9E3 785 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 ZDHHC3Q9NYG2 299 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 RELNP78509 3460 aa22.58■■□□□ 1.21
COL27A1-208ENST00000494780 CCDC66A2RUB6 948 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 GSAPA4D1B5 854 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 ARGFXA6NJG6 315 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 IFRD1O00458 451 aaPredicted RBP22.57■■□□□ 1.2
COL27A1-208ENST00000494780 ZNF189O75820 626 aaPredicted RBP22.57■■□□□ 1.2
COL27A1-208ENST00000494780 CD151P48509 253 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 CCL11P51671 97 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 ABRQ12979 859 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 CCDC110Q8TBZ0 833 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 ADAMTS17Q8TE56 1095 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 CLIP3Q96DZ5 547 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 NLNQ9BYT8 704 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 PITPNM3Q9BZ71 974 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms