RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 PDHA2P29803 388 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 PREPP48147 710 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 TLE1Q04724 770 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 ABRQ12979 859 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 DNASE1L3Q13609 305 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 ERV3-1Q14264 604 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 PRPSAP1Q14558 356 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 POU6F1Q14863 301 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 GPR19Q15760 415 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 FAM69BQ5VUD6 431 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 FAM199XQ6PEV8 388 aaPredicted RBP11.34□□□□□ -0.59
VTI1A-208ENST00000494728 ATG14Q6ZNE5 492 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 PEX26Q7Z412 305 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 SNX20Q7Z614 316 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 PRUNE1Q86TP1 453 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 SERPINA9Q86WD7 417 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 CFAP206Q8IYR0 622 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 SIDT2Q8NBJ9 832 aaKnown RBP11.34□□□□□ -0.59
VTI1A-208ENST00000494728 SLC38A9Q8NBW4 561 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 SLC35B2Q8TB61 432 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 UBXN4Q92575 508 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 ABHD17AQ96GS6 310 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 BAG1Q99933 345 aaPredicted RBP11.34□□□□□ -0.59
VTI1A-208ENST00000494728 TMEM121Q9BTD3 319 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 OR52A5Q9H2C5 316 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 COG4Q9H9E3 785 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 FGF21Q9NSA1 209 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 TUBD1Q9UJT1 453 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 POMT2Q9UKY4 750 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 PRSS21Q9Y6M0 314 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 ANKRD12Q6UB98 2062 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 HIVEP3Q5T1R4 2406 aa11.34□□□□□ -0.59
VTI1A-208ENST00000494728 PCM1Q15154 2024 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 H7C0S8 307 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 KATNA1O75449 491 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 DNAJB5O75953 348 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 STK10O94804 968 aaKnown RBP11.33□□□□□ -0.6
VTI1A-208ENST00000494728 PDGFAP04085 211 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 SFTPCP11686 197 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 ATP1B2P14415 290 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-208ENST00000494728 POLR2CP19387 275 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-208ENST00000494728 ITGALP20701 1170 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 CSRP3P50461 194 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 KCNC4Q03721 635 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 GPS2Q13227 327 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 IL10RAQ13651 578 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 SEPT6Q14141 434 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 DBN1Q16643 649 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 KCTD19Q17RG1 926 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-208ENST00000494728 CCDC38Q502W7 563 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 CRTC2Q53ET0 693 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-208ENST00000494728 ZNF789Q5FWF6 425 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 LCN10Q6JVE6 187 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 ARHGEF18Q6ZSZ5 1173 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 KIAA1328Q86T90 577 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 OOSP2Q86WS3 158 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 D2HGDHQ8N465 521 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 C9orf43Q8TAL5 461 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-208ENST00000494728 ULK4Q96C45 1275 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 ZNF501Q96CX3 271 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-208ENST00000494728 COPS8Q99627 209 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 EFHD1Q9BUP0 239 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 TLR10Q9BXR5 811 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 TRIM55Q9BYV6 548 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 ACTL8Q9H568 366 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 LHX9Q9NQ69 397 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 NLE1Q9NVX2 485 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-208ENST00000494728 ZDHHC3Q9NYG2 299 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 AMFRQ9UKV5 643 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 RARRES3Q9UL19 164 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 ACSL5Q9ULC5 683 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 TP53TG5Q9Y2B4 290 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 PCDHGA6Q9Y5G7 932 aa11.33□□□□□ -0.6
VTI1A-208ENST00000494728 UNC79Q9P2D8 2635 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 UBA6A0AVT1 1052 aaPredicted RBP11.32□□□□□ -0.6
VTI1A-208ENST00000494728 CDC14CA4D256 554 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 BTN3A3O00478 584 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 BTN3A1O00481 513 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 IPO7O95373 1038 aaKnown RBP11.32□□□□□ -0.6
VTI1A-208ENST00000494728 AP2A1O95782 977 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 PVRP15151 417 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 ST6GAL1P15907 406 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 HADHAP40939 763 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 GRIA1P42261 906 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 HSD11B2P80365 405 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 PARP6Q2NL67 630 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 ZRANB3Q5FWF4 1079 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 CPZQ66K79 652 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 KLHL35Q6PF15 583 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 NAPRTQ6XQN6 538 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 GLIS1Q8NBF1 620 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 OR4E2Q8NGC2 313 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 OR52E1Q8NGJ3 308 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 APOBEC4Q8WW27 367 aaKnown RBP11.32□□□□□ -0.6
VTI1A-208ENST00000494728 DCUN1D1Q96GG9 259 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 CDKN2AIPNLQ96HQ2 116 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 HES6Q96HZ4 224 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 CALR3Q96L12 384 aaKnown RBP11.32□□□□□ -0.6
VTI1A-208ENST00000494728 CD180Q99467 661 aa11.32□□□□□ -0.6
VTI1A-208ENST00000494728 FERMT1Q9BQL6 677 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms