RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 RNF31Q96EP0 1072 aa15.21■□□□□ 0.03
LIMS2-216ENST00000494613 SLC41A2Q96JW4 573 aa15.21■□□□□ 0.03
LIMS2-216ENST00000494613 RANBP9Q96S59 729 aa15.21■□□□□ 0.03
LIMS2-216ENST00000494613 COG4Q9H9E3 785 aa15.21■□□□□ 0.03
LIMS2-216ENST00000494613 UBA6A0AVT1 1052 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-216ENST00000494613 HEATR9A2RTY3 570 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 CEP104O60308 925 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 SPAG6O75602 509 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 AP2A2O94973 939 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 FGF5P12034 268 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 POLR2CP19387 275 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-216ENST00000494613 NDUFS1P28331 727 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 CXCR5P32302 372 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 FOXN2P32314 431 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 NSG1P42857 185 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 CD151P48509 253 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 RPA4Q13156 261 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 KCNAB1Q14722 419 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 ARMC6Q6NXE6 501 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 C6orf15Q6UXA7 325 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-216ENST00000494613 CERS6Q6ZMG9 384 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 ZNF605Q86T29 641 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 SIDT2Q8NBJ9 832 aaKnown RBP15.2■□□□□ 0.02
LIMS2-216ENST00000494613 MAIP1Q8WWC4 291 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 SLC45A3Q96JT2 553 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 ARHGAP9Q9BRR9 750 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 ULBP3Q9BZM4 244 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 VPS37BQ9H9H4 285 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 GPN2Q9H9Y4 310 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-216ENST00000494613 RIMKLBQ9ULI2 386 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 ZKSCAN5Q9Y2L8 839 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 PPP2R2CQ9Y2T4 447 aa15.2■□□□□ 0.02
LIMS2-216ENST00000494613 IFRD1O00458 451 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-216ENST00000494613 NKX2-8O15522 239 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 GOT2P00505 430 aaKnown RBP15.19■□□□□ 0.02
LIMS2-216ENST00000494613 GSTM1P09488 218 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 PREPP48147 710 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 ARCN1P48444 511 aaKnown RBP15.19■□□□□ 0.02
LIMS2-216ENST00000494613 GSTM4Q03013 218 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 ACVR1Q04771 509 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 MAP7Q14244 749 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 ITIH4Q14624 930 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 BRD3Q15059 726 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 DNTTIP2Q5QJE6 756 aaKnown RBP15.19■□□□□ 0.02
LIMS2-216ENST00000494613 LYPLAL1Q5VWZ2 237 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 C4orf22Q6V702 233 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 GSTA5Q7RTV2 222 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 OOSP2Q86WS3 158 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 GALNT6Q8NCL4 622 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 ACVR1CQ8NER5 493 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 OR6P1Q8NGX9 317 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 OR4L1Q8NH43 312 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 LCN9Q8WX39 176 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 TFGQ92734 400 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-216ENST00000494613 KIAA1143Q96AT1 154 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-216ENST00000494613 PPM1MQ96MI6 270 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 CD180Q99467 661 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 NRTNQ99748 197 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 SRMSQ9H3Y6 488 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 PDE7BQ9NP56 450 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 CHRAC1Q9NRG0 131 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 IL17BQ9UHF5 180 aa15.19■□□□□ 0.02
LIMS2-216ENST00000494613 FASNP49327 2511 aaKnown RBP15.18■□□□□ 0.02
LIMS2-216ENST00000494613 OR1I1O60431 355 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 KIAA0754O94854 1291 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 F8A1P23610 371 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 ARL4DP49703 201 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 KPNA2P52292 529 aaKnown RBP15.18■□□□□ 0.02
LIMS2-216ENST00000494613 HSD11B2P80365 405 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 PRKG2Q13237 762 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 KCTD19Q17RG1 926 aaPredicted RBP15.18■□□□□ 0.02
LIMS2-216ENST00000494613 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.18■□□□□ 0.02
LIMS2-216ENST00000494613 PCID2Q5JVF3 399 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 FBXO38Q6PIJ6 1188 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 NAPRTQ6XQN6 538 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 NLRP9Q7RTR0 991 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 BPHLQ86WA6 291 aaPredicted RBP15.18■□□□□ 0.02
LIMS2-216ENST00000494613 PPP1R3BQ86XI6 285 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 KMT5CQ86Y97 462 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 D2HGDHQ8N465 521 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 ESX1Q8N693 406 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 SGSM3Q96HU1 749 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 TTC1Q99614 292 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 EFHD1Q9BUP0 239 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 TFB2MQ9H5Q4 396 aaKnown RBP15.18■□□□□ 0.02
LIMS2-216ENST00000494613 MVB12BQ9H7P6 319 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 HOMER3Q9NSC5 361 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 PADI1Q9ULC6 663 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 TCAF1Q9Y4C2 921 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 RPS6KL1Q9Y6S9 549 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 ZNF106Q9H2Y7 1883 aaKnown RBP15.18■□□□□ 0.02
LIMS2-216ENST00000494613 PIEZO2Q9H5I5 2752 aa15.18■□□□□ 0.02
LIMS2-216ENST00000494613 TLCD2A6NGC4 264 aa15.17■□□□□ 0.02
LIMS2-216ENST00000494613 ZNF891A8MT65 544 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-216ENST00000494613 B8ZZF3 427 aa15.17■□□□□ 0.02
LIMS2-216ENST00000494613 QSOX1O00391 747 aa15.17■□□□□ 0.02
LIMS2-216ENST00000494613 LIN7AO14910 233 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-216ENST00000494613 TIAF1O95411 115 aa15.17■□□□□ 0.02
LIMS2-216ENST00000494613 ZBTB11O95625 1053 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-216ENST00000494613 OR56A5P0C7T3 313 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms