RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 C12orf66Q96MD2 445 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 OLFM1Q99784 485 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 OR52A5Q9H2C5 316 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 IMP3Q9NV31 184 aaKnown RBP14.25□□□□□ -0.13
BRCA1-223ENST00000494123 ARGLU1Q9NWB6 273 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-223ENST00000494123 SCHIP1Q9P0W5 487 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-223ENST00000494123 KLHL42Q9P2K6 505 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 FETUBQ9UGM5 382 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 TSR3Q9UJK0 312 aaKnown RBP14.25□□□□□ -0.13
BRCA1-223ENST00000494123 CDV3Q9UKY7 258 aaKnown RBP14.25□□□□□ -0.13
BRCA1-223ENST00000494123 WDR37Q9Y2I8 494 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 MED16Q9Y2X0 877 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 OR52A4PA6NMU1 304 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 NOBOXO60393 691 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 SLCO2B1O94956 709 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 LDOC1O95751 146 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-223ENST00000494123 SHBGP04278 402 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 BRAFP15056 766 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 STMN1P16949 149 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 CD9P21926 228 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 CNTFP26441 200 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 RGS4P49798 205 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 TAS2R39P59534 338 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 BMPR2Q13873 1038 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 KRT33BQ14525 404 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 CLCA4Q14CN2 919 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 NR0B2Q15466 257 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 LGSNQ5TDP6 509 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 XKR5Q6UX68 686 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 SLC9B2Q86UD5 537 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 PDZD3Q86UT5 571 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 SFTPA2Q8IWL1 248 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 SLC22A15Q8IZD6 547 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 SFRP1Q8N474 314 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 FAM181AQ8N9Y4 354 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 AVL9Q8NBF6 648 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 GPR156Q8NFN8 814 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 SPDYE1Q8NFV5 336 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-223ENST00000494123 GIMAP7Q8NHV1 300 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 SLC37A2Q8TED4 501 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 DCAKDQ8WVC6 231 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 CNDP2Q96KP4 475 aaKnown RBP14.24□□□□□ -0.13
BRCA1-223ENST00000494123 RMDN2Q96LZ7 410 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 CAMK1GQ96NX5 476 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 SLC30A3Q99726 388 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 SLC32A1Q9H598 525 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 CAB39LQ9H9S4 337 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 PPCSQ9HAB8 311 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 SLC24A2Q9UI40 661 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 ZNF180Q9UJW8 692 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 CDYLQ9Y232 598 aa14.24□□□□□ -0.13
BRCA1-223ENST00000494123 CFAP20Q9Y6A4 193 aaKnown RBP14.24□□□□□ -0.13
BRCA1-223ENST00000494123 COL5A1P20908 1838 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-223ENST00000494123 PTPRZ1P23471 2315 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 KRT37O76014 449 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 VIPP01282 170 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 NUDT17P0C025 328 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 CBSLP0DN79 551 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 ATP5DP30049 168 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 CBSP35520 551 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 DUSP3P51452 185 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 MAZP56270 477 aaKnown RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 TIAL1Q01085 375 aaKnown RBP eCLIP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 RPE65Q16518 533 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 PAQR3Q6TCH7 311 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 RAPH1Q70E73 1250 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 VRK3Q8IV63 474 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 CPNE9Q8IYJ1 553 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 FOPNLQ96NB1 174 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 INSM2Q96T92 566 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 CDC6Q99741 560 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 POPDC3Q9HBV1 291 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 SYTL2Q9HCH5 934 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 PSMC3IPQ9P2W1 217 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 PADI4Q9UM07 663 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 HEBP2Q9Y5Z4 205 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 ARID1BQ8NFD5 2236 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 CPED1A4D0V7 1026 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 SMIM23A6NLE4 172 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 MTHFD1P11586 935 aaKnown RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 MYF5P13349 255 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 ENO3P13929 434 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 XRCC1P18887 633 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 PGGT1BP53609 377 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 IL2P60568 153 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 RAB10P61026 200 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 HHEXQ03014 270 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 ABRQ12979 859 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 ZNF460Q14592 562 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 PROX2Q3B8N5 592 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 ACSBG2Q5FVE4 666 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 CAPRIN2Q6IMN6 1127 aaKnown RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 LRRC8EQ6NSJ5 796 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 ADGRD1Q6QNK2 874 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 ARL14Q8N4G2 192 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 OR2W6PQ8NHA6 318 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 CFAP61Q8NHU2 1237 aa14.23□□□□□ -0.13
BRCA1-223ENST00000494123 HNRNPLLQ8WVV9 542 aaKnown RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 TFGQ92734 400 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-223ENST00000494123 DHRS4Q9BTZ2 278 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms