RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 EPHA5P54756 1037 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 CDH15P55291 814 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 YBX1P67809 324 aaKnown RBP13.55□□□□□ -0.24
VCP-207ENST00000493886 SBSNQ6UWP8 590 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 TPRG1Q6ZUI0 275 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 CATSPER1Q8NEC5 780 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 SLCO4A1Q96BD0 722 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 TMIGD2Q96BF3 282 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 ECHDC3Q96DC8 303 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 TLR9Q9NR96 1032 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 SLC25A13Q9UJS0 675 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 AURKCQ9UQB9 309 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 SH3GLB1Q9Y371 365 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 PDE4DIPQ5VU43 2346 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 SLC25A14O95258 325 aaPredicted RBP13.55□□□□□ -0.24
VCP-207ENST00000493886 TRIM16O95361 564 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 DDX6P26196 483 aaKnown RBP eCLIP13.55□□□□□ -0.241e-13■■□□□ 11.6
VCP-207ENST00000493886 CTNNB1P35222 781 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 GPR33Q49SQ1 333 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 GPRIN3Q6ZVF9 776 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 EFL1Q7Z2Z2 1120 aaKnown RBP13.55□□□□□ -0.24
VCP-207ENST00000493886 MIER2Q8N344 545 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 GPR26Q8NDV2 337 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 SCRN2Q96FV2 425 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 TMEM79Q9BSE2 394 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 BBS2Q9BXC9 721 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 MRPS26Q9BYN8 205 aaKnown RBP13.55□□□□□ -0.24
VCP-207ENST00000493886 SPAG4Q9NPE6 437 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 RNF11Q9Y3C5 154 aa13.55□□□□□ -0.24
VCP-207ENST00000493886 AKAP10O43572 662 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 CHEK2O96017 543 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 PTPN2P17706 415 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 PSMD8P48556 350 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 RGS4P49798 205 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 CAPRIN1Q14444 709 aaKnown RBP13.54□□□□□ -0.24
VCP-207ENST00000493886 LRRC66Q68CR7 880 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 DPY19L3Q6ZPD9 716 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 AHI1Q8N157 1196 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 NXPE1Q8N323 547 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 ASIC4Q96FT7 647 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 ZDHHC6Q9H6R6 413 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 TDP1Q9NUW8 608 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 SLCO3A1Q9UIG8 710 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 CNOT6Q9ULM6 557 aaKnown RBP13.54□□□□□ -0.24
VCP-207ENST00000493886 GMEB1Q9Y692 573 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 LINC00854A0A1B0GVQ3 168 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 FGF19O95750 216 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 RHOP08100 348 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 PABPC1P11940 636 aaKnown RBP13.54□□□□□ -0.24
VCP-207ENST00000493886 BMPR1AP36894 532 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 CAMK2BQ13554 666 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 CARD16Q5EG05 197 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 C6orf10Q5SRN2 563 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 C6orf183Q5T699 404 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 KRT80Q6KB66 452 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 HACD2Q6Y1H2 254 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 USP45Q70EL2 814 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 CANT1Q8WVQ1 401 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 ZNF382Q96SR6 550 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 CCT7Q99832 543 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 HTATIP2Q9BUP3 242 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 CPEB1Q9BZB8 566 aaKnown RBP13.54□□□□□ -0.24
VCP-207ENST00000493886 MRPL40Q9NQ50 206 aaKnown RBP13.54□□□□□ -0.24
VCP-207ENST00000493886 PPIL1Q9Y3C6 166 aa13.54□□□□□ -0.24
VCP-207ENST00000493886 OR4F21O95013 312 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 POP4O95707 220 aaKnown RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 PRR35P0CG20 571 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 ATP6V1B2P21281 511 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 DGKAP23743 735 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 PTPN5P54829 565 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 PPIGQ13427 754 aaKnown RBP eCLIP13.53□□□□□ -0.242e-7■■□□□ 12.1
VCP-207ENST00000493886 PCBP2Q15366 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
VCP-207ENST00000493886 C18orf21Q32NC0 220 aaPredicted RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 SLC44A4Q53GD3 710 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 ARHGAP15Q53QZ3 475 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 OGFOD2Q6N063 350 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 HMBOX1Q6NT76 420 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 B3GNT6Q6ZMB0 384 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 MACC1Q6ZN28 852 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 RETREG3Q86VR2 466 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 OR52B6Q8NGF0 335 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 POF1BQ8WVV4 589 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 IRF7Q92985 503 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 RAD9AQ99638 391 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 CEP44Q9C0F1 390 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 SDR39U1Q9NRG7 319 aaPredicted RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 SUCOQ9UBS9 1254 aaKnown RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 TNPO3Q9Y5L0 923 aaKnown RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 BBIP1A8MTZ0 92 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 RAD51BO15315 384 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 FFAR2O15552 330 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 MATN4O95460 622 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 S100BP04271 92 aaPredicted RBP13.53□□□□□ -0.24
VCP-207ENST00000493886 UGT2B4P06133 528 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 IDO1P14902 403 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 RHDQ02161 417 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 RPS6KA2Q15349 733 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 VPS26BQ4G0F5 336 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 XKR7Q5GH72 579 aa13.53□□□□□ -0.24
VCP-207ENST00000493886 SCIMPQ6UWF3 145 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms