RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SLC35G4P0C7Q5 338 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 ERVK-10P10266 1014 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 PPM1FP49593 454 aaPredicted RBP11.35□□□□□ -0.59
CTSA-209ENST00000493522 GABREP78334 506 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 MPP1Q00013 466 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 RHDQ02161 417 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 CTBP1Q13363 440 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 PERM1Q5SV97 790 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 OGFOD3Q6PK18 319 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 LRRC6Q86X45 466 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 LMNTD2Q8IXW0 634 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 CFAP206Q8IYR0 622 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 ARL14Q8N4G2 192 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 OR6C4Q8NGE1 309 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 GSDMBQ8TAX9 411 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 LKAAEAR1Q8TD35 194 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 PYROXD1Q8WU10 500 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 IFT81Q8WYA0 676 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 SEC14L1Q92503 715 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 ELMO1Q92556 727 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 LPGAT1Q92604 370 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 NAF1Q96HR8 494 aaKnown RBP11.35□□□□□ -0.59
CTSA-209ENST00000493522 LINC00615Q96LM1 132 aaPredicted RBP11.35□□□□□ -0.59
CTSA-209ENST00000493522 TCF12Q99081 682 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 CCDC3Q9BQI4 270 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 FOXP3Q9BZS1 431 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 PHACTR1Q9C0D0 580 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 ZMYND15Q9H091 742 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 WWP1Q9H0M0 922 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 ABCG4Q9H172 646 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 FBXO6Q9NRD1 293 aaPredicted RBP11.35□□□□□ -0.59
CTSA-209ENST00000493522 INTS10Q9NVR2 710 aaKnown RBP11.35□□□□□ -0.59
CTSA-209ENST00000493522 VPS9D1Q9Y2B5 631 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 CRYL1Q9Y2S2 319 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 RNF215Q9Y6U7 377 aa11.35□□□□□ -0.59
CTSA-209ENST00000493522 KIR2DS5A0A0G2JLQ3 304 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 A0A0G2JNG1 304 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 EME2A4GXA9 379 aaPredicted RBP11.34□□□□□ -0.59
CTSA-209ENST00000493522 OR5K4A6NMS3 321 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 KIR2DS3K7RE56 304 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 OPA1O60313 960 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 DXOO77932 396 aaKnown RBP11.34□□□□□ -0.59
CTSA-209ENST00000493522 MPOP05164 745 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 GSTM1P09488 218 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 GLB1P16278 677 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 RPS3P23396 243 aaKnown RBP eCLIP11.34□□□□□ -0.593e-9■□□□□ 9.5
CTSA-209ENST00000493522 FMO4P31512 558 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 PREPP48147 710 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 CARSP49589 748 aaKnown RBP11.34□□□□□ -0.59
CTSA-209ENST00000493522 CSE1LP55060 971 aaKnown RBP11.34□□□□□ -0.59
CTSA-209ENST00000493522 ERVPABLB-1P60509 514 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 GSTM4Q03013 218 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 HHEXQ03014 270 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 KIR2DS5Q14953 304 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 BRD3Q15059 726 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 TMED2Q15363 201 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 CTSL3PQ5NE16 218 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 AGAP9Q5VTM2 703 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 CDCP2Q5VXM1 449 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 ZNF449Q6P9G9 518 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 TRMT10BQ6PF06 316 aaKnown RBP11.34□□□□□ -0.59
CTSA-209ENST00000493522 IYDQ6PHW0 289 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 SLC9B2Q86UD5 537 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 C17orf82Q86X59 251 aaPredicted RBP11.34□□□□□ -0.59
CTSA-209ENST00000493522 ZNF761Q86XN6 746 aaPredicted RBP11.34□□□□□ -0.59
CTSA-209ENST00000493522 PALM2Q8IXS6 379 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 KRT222Q8N1A0 295 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 SFRP1Q8N474 314 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 LILRA3Q8N6C8 439 aaPredicted RBP11.34□□□□□ -0.59
CTSA-209ENST00000493522 Q8N9G6 341 aaPredicted RBP11.34□□□□□ -0.59
CTSA-209ENST00000493522 AVL9Q8NBF6 648 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 KCNE4Q8WWG9 221 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 CXorf40BQ96DE9 158 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 WBP1Q96G27 269 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 C9orf72Q96LT7 481 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 RMDN2Q96LZ7 410 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 PANX3Q96QZ0 392 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 FMO2Q99518 471 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 FAM129AQ9BZQ8 928 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 P2RY12Q9H244 342 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 CCDC68Q9H2F9 335 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 PLAC1Q9HBJ0 212 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 THSD1Q9NS62 852 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 ZDHHC18Q9NUE0 388 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 IMP3Q9NV31 184 aaKnown RBP11.34□□□□□ -0.59
CTSA-209ENST00000493522 SCHIP1Q9P0W5 487 aaPredicted RBP11.34□□□□□ -0.59
CTSA-209ENST00000493522 SLC17A6Q9P2U8 582 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 LRIT1Q9P2V4 623 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 FBXO5Q9UKT4 447 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 ACSL5Q9ULC5 683 aa11.34□□□□□ -0.59
CTSA-209ENST00000493522 SNRNP200O75643 2136 aaKnown RBP11.33□□□□□ -0.6
CTSA-209ENST00000493522 C17orf113A0A1B0GUU1 675 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 OR52A4PA6NMU1 304 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 IQCF5A8MTL0 148 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 BHMG1C9JSJ3 638 aaPredicted RBP11.33□□□□□ -0.6
CTSA-209ENST00000493522 E5RI56 91 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 J3QKU1 62 aa11.33□□□□□ -0.6
CTSA-209ENST00000493522 LIN7AO14910 233 aaPredicted RBP11.33□□□□□ -0.6
CTSA-209ENST00000493522 NUDT21O43809 227 aaKnown RBP11.33□□□□□ -0.6
CTSA-209ENST00000493522 NIPSNAP2O75323 286 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms