RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 MT-ND3P03897 115 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 RPN2P04844 631 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 F3P13726 295 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 KRT15P19012 456 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 TGM1P22735 817 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 NDUFS1P28331 727 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 RPIAP49247 311 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 TIAL1Q01085 375 aaKnown RBP eCLIP11.31□□□□□ -0.6
LSM2-214ENST00000493387 ZNF844Q08AG5 666 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 BMPR2Q13873 1038 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 KRT71Q3SY84 523 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 ACSBG2Q5FVE4 666 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 CEP85LQ5SZL2 805 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 CAPRIN2Q6IMN6 1127 aaKnown RBP11.31□□□□□ -0.6
LSM2-214ENST00000493387 IYDQ6PHW0 289 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 OGFOD3Q6PK18 319 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 PAQR3Q6TCH7 311 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 KANSL1Q7Z3B3 1105 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 TBC1D1Q86TI0 1168 aaPredicted RBP11.31□□□□□ -0.6
LSM2-214ENST00000493387 PDZD3Q86UT5 571 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 SLC25A45Q8N413 288 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 OR4C6Q8NH72 309 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 ZDHHC1Q8WTX9 485 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 FAM136AQ96C01 138 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 ZIM3Q96PE6 472 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 STMN4Q9H169 189 aaPredicted RBP11.31□□□□□ -0.6
LSM2-214ENST00000493387 OR52A5Q9H2C5 316 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 ACBD3Q9H3P7 528 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 STN1Q9H668 368 aaKnown RBP11.31□□□□□ -0.6
LSM2-214ENST00000493387 PARD6AQ9NPB6 346 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 PRDM8Q9NQV8 689 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 SNX15Q9NRS6 342 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 UCKL1Q9NWZ5 548 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.31□□□□□ -0.6
LSM2-214ENST00000493387 FAM8A1Q9UBU6 413 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 TBC1D29Q9UFV1 150 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 TBK1Q9UHD2 729 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 ACOT9Q9Y305 439 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 LRP4O75096 1905 aa11.31□□□□□ -0.6
LSM2-214ENST00000493387 TDRD6O60522 2096 aaKnown RBP11.31□□□□□ -0.6
LSM2-214ENST00000493387 A6NCN8 305 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 DYNC1I1O14576 645 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 CDX4O14627 284 aaPredicted RBP11.3□□□□□ -0.6
LSM2-214ENST00000493387 RGS16O15492 202 aaPredicted RBP11.3□□□□□ -0.6
LSM2-214ENST00000493387 FLRT2O43155 660 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 ALDOAP04075 364 aaKnown RBP11.3□□□□□ -0.6
LSM2-214ENST00000493387 C2P06681 752 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 CELA2BP08218 269 aaPredicted RBP11.3□□□□□ -0.6
LSM2-214ENST00000493387 MYZAPP0CAP1 466 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 COL6A2P12110 1019 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 ZNF37AP17032 561 aaPredicted RBP11.3□□□□□ -0.6
LSM2-214ENST00000493387 RPL10P27635 214 aaKnown RBP11.3□□□□□ -0.6
LSM2-214ENST00000493387 ACADLP28330 430 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 GRK6P43250 576 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 MAGEA12P43365 314 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 PREPP48147 710 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 ATP6V0D1P61421 351 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 IL9RQ01113 521 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 DEFB133Q30KQ1 61 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 ZCCHC8Q6NZY4 707 aaKnown RBP11.3□□□□□ -0.6
LSM2-214ENST00000493387 TTC23LQ6PF05 361 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 UNC5DQ6UXZ4 953 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 DBX2Q6ZNG2 339 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 ASCL5Q7RTU5 278 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 SLC9B2Q86UD5 537 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 PIM3Q86V86 326 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 LCA5Q86VQ0 697 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 CEP97Q8IW35 865 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 RBM12BQ8IXT5 1001 aaKnown RBP11.3□□□□□ -0.6
LSM2-214ENST00000493387 CPNE9Q8IYJ1 553 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 MYO1HQ8N1T3 1032 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 LILRA3Q8N6C8 439 aaPredicted RBP11.3□□□□□ -0.6
LSM2-214ENST00000493387 FAM181AQ8N9Y4 354 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 ACVR1CQ8NER5 493 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 OR6C4Q8NGE1 309 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 GIMAP7Q8NHV1 300 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 MAGEC3Q8TD91 643 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 SKA2Q8WVK7 121 aaPredicted RBP11.3□□□□□ -0.6
LSM2-214ENST00000493387 ZFPM2Q8WW38 1151 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 TFGQ92734 400 aaPredicted RBP11.3□□□□□ -0.6
LSM2-214ENST00000493387 TSNARE1Q96NA8 513 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 DERL2Q9GZP9 239 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 WWP1Q9H0M0 922 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 MVB12BQ9H7P6 319 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 CAB39LQ9H9S4 337 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 NMRAL1Q9HBL8 299 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 EURLQ9NYK6 297 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 SENP1Q9P0U3 644 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 GALPQ9UBC7 116 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 CDYLQ9Y232 598 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 ST14Q9Y5Y6 855 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 COLEC10Q9Y6Z7 277 aa11.3□□□□□ -0.6
LSM2-214ENST00000493387 A0A096LPK6 155 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 SLC16A5O15375 505 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 FFAR2O15552 330 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 PHGDHO43175 533 aaKnown RBP11.29□□□□□ -0.6
LSM2-214ENST00000493387 KDM1AO60341 852 aa11.29□□□□□ -0.6
LSM2-214ENST00000493387 WISP3O95389 354 aaPredicted RBP11.29□□□□□ -0.6
LSM2-214ENST00000493387 C8GP07360 202 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms