RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ALKBH7Q9BT30 221 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PAPOLGQ9BWT3 736 aaKnown RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 BOCQ9BWV1 1114 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ANGPTL4Q9BY76 406 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 GRIP2Q9C0E4 1043 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ZMYND12Q9H0C1 365 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 RACGAP1Q9H0H5 632 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 GAL3ST2Q9H3Q3 398 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 MED20Q9H944 212 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 SLC38A10Q9HBR0 1119 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CHST11Q9NPF2 352 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CHRAC1Q9NRG0 131 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 TREX1Q9NSU2 369 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ZCCHC3Q9NUD5 404 aaKnown RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 SLCO1C1Q9NYB5 712 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 KCMF1Q9P0J7 381 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 HSFX1Q9UBD0 423 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CGGBP1Q9UFW8 167 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 MSRAQ9UJ68 235 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 NAGKQ9UJ70 344 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 DBNLQ9UJU6 430 aaKnown RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CDH9Q9ULB4 789 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CBLCQ9ULV8 474 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 NENFQ9UMX5 172 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ADAMTS5Q9UNA0 930 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 KCNK6Q9Y257 313 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 GPR55Q9Y2T6 319 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PCDHA13Q9Y5I0 950 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PCDHA1Q9Y5I3 950 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PCDHAC2Q9Y5I4 1007 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 RAD54BQ9Y620 910 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CFAP20Q9Y6A4 193 aaKnown RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 MAP3K15Q6ZN16 1313 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 RFX7Q2KHR2 1363 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CCNB3Q8WWL7 1395 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 NCAPD2Q15021 1401 aa4.15□□□□□ -1.75
BRCA1-220ENST00000492859 A0A1W2PPV4 95 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FAM90A18PA6NE21 464 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FAM90A16PA6NEW6 464 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ARHGAP42A6NI28 874 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FAM90A9PA6NNJ1 464 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 BECN2A8MW95 431 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FAM90A5PA8MXJ8 464 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 A8MZ25 164 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 C2orf74A8MZ97 194 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 KCNJ18B7U540 433 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 F8VP50 259 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CCDC188H7C350 402 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ARNTLO00327 626 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PEX12O00623 359 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PAPSS1O43252 624 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 UGDHO60701 494 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 MAGEC1O60732 1142 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 KDM4BO94953 1096 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 MT-ND2P03891 347 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 IFNA6P05013 189 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ENO1P06733 434 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TMEM253P0C7T8 217 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FAM90A15PP0C7V4 464 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 FAM90A14PP0C7W9 464 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CYP4B1P13584 511 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 MTHFD2P13995 350 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 IFNGR1P15260 489 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CBR1P16152 277 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 EGR1P18146 543 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 NR1D1P20393 614 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 MX1P20591 662 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 MAGP20916 626 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ATP6V1C1P21283 382 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ACO1P21399 889 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CCNOP22674 350 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TCEA1P23193 301 aaKnown RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RBL1P28749 1068 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TYK2P29597 1187 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SERPINB1P30740 379 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 HOXA7P31268 230 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 GJA4P35212 333 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CASRP41180 1078 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 NAA10P41227 235 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-220ENST00000492859 WASP42768 502 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SLC1A1P43005 524 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RAP1GAPP47736 663 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 NDST2P52849 883 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PLK1P53350 603 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 EMP2P54851 167 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TIRAPP58753 221 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 DAOAP59103 153 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TNNC1P63316 161 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 CSNK1G2P78368 415 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 GHRHRQ02643 423 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 RING1Q06587 406 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 PDCLQ13371 301 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 GRAPQ13588 217 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 TP53BP2Q13625 1128 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 KCNJ12Q14500 433 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 INPP5AQ14642 412 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 SHBQ15464 509 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF174Q15697 407 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 WHAMMP3Q1A5X7 153 aa4.14□□□□□ -1.75
BRCA1-220ENST00000492859 LSM12Q3MHD2 195 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms