RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 FBXO43Q4G163 708 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 SLC35F1Q5T1Q4 408 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 SH3PXD2AQ5TCZ1 1133 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 CACHD1Q5VU97 1274 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 TRNP1Q6NT89 227 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 TMEM151BQ8IW70 566 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 ZNF540Q8NDQ6 660 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 C3orf58Q8NDZ4 430 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 PTERQ96BW5 349 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 B3GALT6Q96L58 329 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 MCCC1Q96RQ3 725 aaPredicted RBP9.55□□□□□ -0.88
VPS8-225ENST00000492449 NIF3L1Q9GZT8 377 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 SLC6A15Q9H2J7 730 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 TMEM245Q9H330 911 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 AKTIPQ9H8T0 292 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 FBRSL1Q9HCM7 1045 aaKnown RBP9.55□□□□□ -0.88
VPS8-225ENST00000492449 FANCFQ9NPI8 374 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 TMEM39AQ9NV64 488 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 GLS2Q9UI32 602 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 HSPB11Q9Y547 144 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 PCDHB5Q9Y5E4 795 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 FKBP7Q9Y680 259 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 CACNG2Q9Y698 323 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 COL1A2P08123 1366 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 A0A087X1B8 175 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 H0YCG3 227 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 HUS1O60921 280 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 PSAPP07602 524 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 RRASP10301 218 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 HOXB6P17509 224 aaKnown RBP9.55□□□□□ -0.88
VPS8-225ENST00000492449 ALAS2P22557 587 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 ATICP31939 592 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 TKTL1P51854 596 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 RAB25P57735 213 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 RAB10P61026 200 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 SCN1BQ07699 218 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 LAPTM5Q13571 262 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 RCAN2Q14206 197 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 USP10Q14694 798 aaKnown RBP9.55□□□□□ -0.88
VPS8-225ENST00000492449 PON2Q15165 354 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 COMMD7Q86VX2 200 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 TMC8Q8IU68 726 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 ZNF680Q8NEM1 530 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 OR7G3Q8NG95 312 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 WDR48Q8TAF3 677 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 ITFG1Q8TB96 612 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 INTS12Q96CB8 462 aaKnown RBP9.55□□□□□ -0.88
VPS8-225ENST00000492449 ADPGKQ9BRR6 497 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 WACQ9BTA9 647 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 BEX2Q9BXY8 128 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 SRRQ9GZT4 340 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 GORASP2Q9H8Y8 452 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 MCCC2Q9HCC0 563 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 PAK6Q9NQU5 681 aaPredicted RBP9.55□□□□□ -0.88
VPS8-225ENST00000492449 DYRK4Q9NR20 520 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 TMEM45AQ9NWC5 275 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 KLK4Q9Y5K2 254 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 ORC6Q9Y5N6 252 aa9.55□□□□□ -0.88
VPS8-225ENST00000492449 BRCA1P38398 1863 aaKnown RBP9.55□□□□□ -0.88
VPS8-225ENST00000492449 MYO18AQ92614 2054 aaKnown RBP9.55□□□□□ -0.88
VPS8-225ENST00000492449 RPS10-NUDT3A0A1W2PQS6 291 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 SEC22BO75396 215 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 RFPL3O75679 317 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 PDE9AO76083 593 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 CELF2O95319 508 aaKnown RBP9.54□□□□□ -0.88
VPS8-225ENST00000492449 PGK1P00558 417 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 PIGRP01833 764 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 NPR3P17342 541 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 GGT1P19440 569 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 ZP3P21754 424 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 TNFSF8P32971 234 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 GLUD2P49448 558 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 OR4D2P58180 307 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 SNRPD2P62316 118 aaKnown RBP9.54□□□□□ -0.88
VPS8-225ENST00000492449 TFAP2EQ6VUC0 442 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 GALNT10Q86SR1 603 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 OR8H1Q8NGG4 311 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 LRRN4Q8WUT4 740 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 AKAP1Q92667 903 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS8-225ENST00000492449 TBC1D20Q96BZ9 403 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 ZC3HAV1LQ96H79 300 aaKnown RBP9.54□□□□□ -0.88
VPS8-225ENST00000492449 C3orf30Q96M34 536 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 IL1RAPQ9NPH3 570 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 EXD2Q9NVH0 621 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 EVA1BQ9NVM1 165 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 SMPD4Q9NXE4 827 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 CPNE7Q9UBL6 633 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 CDH9Q9ULB4 789 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 TNPO3Q9Y5L0 923 aaKnown RBP9.54□□□□□ -0.88
VPS8-225ENST00000492449 HS6ST1O60243 411 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 IPO13O94829 963 aaKnown RBP9.54□□□□□ -0.88
VPS8-225ENST00000492449 CST1P01037 141 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 RAB3AP20336 220 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 CD72P21854 359 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 ZFP36L2P47974 494 aaKnown RBP9.54□□□□□ -0.88
VPS8-225ENST00000492449 GRK1Q15835 563 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 ZNF79Q15937 498 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 RAB6CQ53S08 254 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 RETSATQ6NUM9 610 aa9.54□□□□□ -0.88
VPS8-225ENST00000492449 NECAB2Q7Z6G3 386 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms