RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 GAPDHSO14556 408 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-212ENST00000492407 KLHL41O60662 606 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 MFAP3LO75121 409 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 VPS4BO75351 444 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 SCRG1O75711 98 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 CEACAM4O75871 244 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 TIAF1O95411 115 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 CRTAMO95727 393 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 APOC2P02655 101 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 CD63P08962 238 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 CCDC175P0C221 793 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 SLC35G4P0C7Q5 338 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 EBLN1P0CF75 366 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 IRX1P78414 480 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-212ENST00000492407 ADCY2Q08462 1091 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 PRKAA1Q13131 559 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 TMED1Q13445 227 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 NFE2L1Q14494 772 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 GPR33Q49SQ1 333 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 FNBP1LQ5T0N5 605 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 FAM151BQ6UXP7 276 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 FAM83HQ6ZRV2 1179 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-212ENST00000492407 BBS12Q6ZW61 710 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 GOLGA6L1Q8N7Z2 621 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 ACVR1CQ8NER5 493 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 VPS37AQ8NEZ2 397 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 GPR150Q8NGU9 434 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 CPT1BQ92523 772 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 LRRC45Q96CN5 670 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 ZNF501Q96CX3 271 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-212ENST00000492407 OXNAD1Q96HP4 312 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-212ENST00000492407 RMDN2Q96LZ7 410 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 INSM2Q96T92 566 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-212ENST00000492407 CHP1Q99653 195 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 NLNQ9BYT8 704 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 FANCEQ9HB96 536 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 IMP3Q9NV31 184 aaKnown RBP8.9□□□□□ -0.98
HDAC3-212ENST00000492407 SAE1Q9UBE0 346 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-212ENST00000492407 RSPH14Q9UHP6 348 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 VPS4AQ9UN37 437 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 G3BP2Q9UN86 482 aaKnown RBP8.9□□□□□ -0.98
HDAC3-212ENST00000492407 ZFC3H1O60293 1989 aaKnown RBP8.9□□□□□ -0.99
HDAC3-212ENST00000492407 LRRK2Q5S007 2527 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 OR6C74A6NCV1 312 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 OR2AG2A6NM03 316 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 CFAP99D6REC4 459 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 MEN1O00255 615 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 SRP72O76094 671 aaKnown RBP8.89□□□□□ -0.99
HDAC3-212ENST00000492407 TPPPO94811 219 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 LCA5LO95447 670 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 PRAMEF1O95521 474 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 IGHEP01854 428 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 HBQ1P09105 142 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 PECAM1P16284 738 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-212ENST00000492407 AKT1P31749 480 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 ADRA1AP35348 466 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 HADHAP40939 763 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 CHRNA4P43681 627 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 PGDP52209 483 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 RPA4Q13156 261 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 PRPSAP1Q14558 356 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 SKOR2Q2VWA4 1001 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-212ENST00000492407 C11orf63Q6NUN7 778 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 ZNF449Q6P9G9 518 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 C16orf87Q6PH81 154 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 MED25Q71SY5 747 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 ZC3H18Q86VM9 953 aaKnown RBP8.89□□□□□ -0.99
HDAC3-212ENST00000492407 TMEM126BQ8IUX1 230 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 SLC25A41Q8N5S1 370 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 TMEM102Q8N9M5 508 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-212ENST00000492407 GLIS1Q8NBF1 620 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 IPMKQ8NFU5 416 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 HM13Q8TCT9 377 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 ADAMTS17Q8TE56 1095 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 C17orf50Q8WW18 174 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 DCUN1D1Q96GG9 259 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 C12orf66Q96MD2 445 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 IP6K3Q96PC2 410 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 C17orf62Q9BQA9 187 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 DHRS4Q9BTZ2 278 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 SLC25A23Q9BV35 468 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 PITPNM3Q9BZ71 974 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 CHRNA10Q9GZZ6 450 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 WWP1Q9H0M0 922 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 ING2Q9H160 280 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 GBA3Q9H227 469 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 TFB2MQ9H5Q4 396 aaKnown RBP8.89□□□□□ -0.99
HDAC3-212ENST00000492407 ASB8Q9H765 288 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 VPS37BQ9H9H4 285 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 ARNT2Q9HBZ2 717 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 LUC7LQ9NQ29 371 aaKnown RBP8.89□□□□□ -0.99
HDAC3-212ENST00000492407 ACSS2Q9NR19 701 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 SPTLC3Q9NUV7 552 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 CUEDC1Q9NWM3 386 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-212ENST00000492407 SERTAD3Q9UJW9 196 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 POMT2Q9UKY4 750 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 PSMD13Q9UNM6 376 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 PLAAQ9Y263 795 aa8.89□□□□□ -0.99
HDAC3-212ENST00000492407 ZNF451Q9Y4E5 1061 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms